miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37159_dse-mir-279:mirbase
Length = 93
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 atactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgt 60
Query: 61 gactagatccacactcattaataacggtagttc 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 gactagatccacactcattaataacggtagttc 93
>36199_der-mir-279:mirbase
Length = 93
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 1 atactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atactactgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgt 60
Query: 61 gactagatccacactcattaataacggtagttc 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 gactagatccacactcattaataacggtagttc 93
>36421_dme-mir-279:mirbase
Length = 100
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 1 atactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 atactactgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgt 67
Query: 61 gactagatccacactcattaataacggtagttc 93
|||||||||||||||||||||||||||||||||
Sbjct: 68 gactagatccacactcattaataacggtagttc 100
>36422_dme-mir-279:mirbase
Length = 100
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 1 atactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 atactactgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgt 67
Query: 61 gactagatccacactcattaataacggtagttc 93
|||||||||||||||||||||||||||||||||
Sbjct: 68 gactagatccacactcattaataacggtagttc 100
>36873_dpe-mir-279:mirbase
Length = 93
Score = 161 bits (81), Expect = 1e-40
Identities = 90/93 (96%)
Strand = Plus / Plus
Query: 1 atactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgt 60
||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 atactactgtttttagtgagtgagggtccagtgtttcacattgattttcttagtatttgt 60
Query: 61 gactagatccacactcattaataacggtagttc 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 gactagatccacactcattaataacggtagttc 93
>36953_dps-mir-279:mirbase
Length = 95
Score = 161 bits (81), Expect = 1e-40
Identities = 90/93 (96%)
Strand = Plus / Plus
Query: 1 atactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgt 60
||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3 atactactgtttttagtgagtgagggtccagtgtttcacattgattttcttagtatttgt 62
Query: 61 gactagatccacactcattaataacggtagttc 93
|||||||||||||||||||||||||||||||||
Sbjct: 63 gactagatccacactcattaataacggtagttc 95
>37528_dya-mir-279:mirbase
Length = 93
Score = 161 bits (81), Expect = 1e-40
Identities = 90/93 (96%)
Strand = Plus / Plus
Query: 1 atactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgt 60
||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 1 atactactgtttttagtgggtgagggtccagtgcttcacattgattttcttagtatttgt 60
Query: 61 gactagatccacactcattaataacggtagttc 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 gactagatccacactcattaataacggtagttc 93
>36121_dan-mir-279:mirbase
Length = 89
Score = 129 bits (65), Expect = 4e-31
Identities = 87/92 (94%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 2 tactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 61
|||| |||||||||||||||| |||||||||||||||||||||||| || |||||||||
Sbjct: 1 tactactgtttttagtgggtgagggtccagtgtttcacattgattt-ct--gtatttgtg 57
Query: 62 actagatccacactcattaataacggtagttc 93
||||||||||||||||||||||||||||||||
Sbjct: 58 actagatccacactcattaataacggtagttc 89
>36288_dgr-mir-279:mirbase
Length = 91
Score = 119 bits (60), Expect = 4e-28
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 7 ctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtgactag 66
|||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||
Sbjct: 7 ctgtttttagtgggtgagggtccagtgtttcacattg--tttatttgtatttgtgactag 64
Query: 67 atccacactcattaataacggtagttc 93
||||||||||||||| |||||||||||
Sbjct: 65 atccacactcattaaaaacggtagttc 91
>37452_dwi-mir-279:mirbase
Length = 91
Score = 119 bits (60), Expect = 4e-28
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 2 tactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 61
|||| |||||||||||| ||| ||||||||||||||||||| | | | ||||||||||||
Sbjct: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatat-ttagtatttgtg 59
Query: 62 actagatccacactcattaataacggtagttc 93
||||||||||||||||||||||||||||||||
Sbjct: 60 actagatccacactcattaataacggtagttc 91
>36796_dmo-mir-279:mirbase
Length = 93
Score = 113 bits (57), Expect = 2e-26
Identities = 86/93 (92%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 2 tactgctgtttttagtgggtgggggtccagtgtttcacattgattttctta-gtatttgt 60
|||| |||||||||||| ||| |||||||||||||||||||| ||| |||| ||||||||
Sbjct: 2 tactactgtttttagtgagtgagggtccagtgtttcacattg-tttgcttaagtatttgt 60
Query: 61 gactagatccacactcattaataacggtagttc 93
||||||||||||||||||||| |||||||||||
Sbjct: 61 gactagatccacactcattaaaaacggtagttc 93
>37373_dvi-mir-279:mirbase
Length = 94
Score = 105 bits (53), Expect = 5e-24
Identities = 84/93 (90%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 2 tactgctgtttttagtgggtgggggtccagtgtttcacattgattttctta-gtatttgt 60
|||| |||||||||||| ||| ||||||||||||||||||| |||| | | ||||||||
Sbjct: 2 tactactgtttttagtgagtgagggtccagtgtttcacattcgttttttcaagtatttgt 61
Query: 61 gactagatccacactcattaataacggtagttc 93
||||||||||||||||||||| |||||||||||
Sbjct: 62 gactagatccacactcattaacaacggtagttc 94
>35304_aga-mir-279:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 ttgtgactagatccacactcattaat 82
||||||||||||||||||||||||||
Sbjct: 53 ttgtgactagatccacactcattaat 78
>35383_ame-mir-279:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 ttgtgactagatccacactcattaa 81
|||||||||||||||||||||||||
Sbjct: 64 ttgtgactagatccacactcattaa 88
>35209_aae-mir-279:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tgtgactagatccacactcattaa 81
||||||||||||||||||||||||
Sbjct: 59 tgtgactagatccacactcattaa 82
>36037_cqu-mir-279:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tgtgactagatccacactcattaa 81
||||||||||||||||||||||||
Sbjct: 47 tgtgactagatccacactcattaa 70
>37662_nvi-mir-279:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tgtgactagatccacactcattaa 81
||||||||||||||||||||||||
Sbjct: 65 tgtgactagatccacactcattaa 88
>37771_tca-mir-279a:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 gtgactagatccacactcattaa 81
|||||||||||||||||||||||
Sbjct: 42 gtgactagatccacactcattaa 64
>37772_tca-mir-279a:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 gtgactagatccacactcattaa 81
|||||||||||||||||||||||
Sbjct: 42 gtgactagatccacactcattaa 64
