miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36436_dme-mir-286:mirbase
Length = 100
Score = 174 bits (88), Expect = 8e-45
Identities = 98/100 (98%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaaagaaaggtttcgatcaag 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttc-aaagaaaggtttcgattaag 59
Query: 61 cgaagtgactagaccgaacactcgtgctataattttaaaa 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cgaagtgactagaccgaacactcgtgctataattttaaaa 99
>36437_dme-mir-286:mirbase
Length = 100
Score = 174 bits (88), Expect = 8e-45
Identities = 98/100 (98%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaaagaaaggtttcgatcaag 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttc-aaagaaaggtttcgattaag 59
Query: 61 cgaagtgactagaccgaacactcgtgctataattttaaaa 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cgaagtgactagaccgaacactcgtgctataattttaaaa 99
>37167_dse-mir-286:mirbase
Length = 99
Score = 174 bits (88), Expect = 8e-45
Identities = 98/100 (98%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaaagaaaggtttcgatcaag 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaat-aaaggtttcgatcaag 59
Query: 61 cgaagtgactagaccgaacactcgtgctataattttaaaa 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cgaagtgactagaccgaacactcgtgctataattttaaaa 99
>37536_dya-mir-286:mirbase
Length = 98
Score = 168 bits (85), Expect = 5e-43
Identities = 97/100 (97%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaaagaaaggtttcgatcaag 60
||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaaaga--ggtttcgatcaag 58
Query: 61 cgaagtgactagaccgaacactcgtgctataattttaaaa 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 cgaagtgactagaccgaacactcgtgctataattttaaaa 98
>36207_der-mir-286:mirbase
Length = 98
Score = 159 bits (80), Expect = 5e-40
Identities = 97/100 (97%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaaagaaaggtttcgatcaag 60
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttc-aaagaa-ggtttcgatcgag 58
Query: 61 cgaagtgactagaccgaacactcgtgctataattttaaaa 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 cgaagtgactagaccgaacactcgtgctataattttaaaa 98
>36129_dan-mir-286:mirbase
Length = 103
Score = 119 bits (60), Expect = 4e-28
Identities = 94/103 (91%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttc-caaagaaa--ggtttcgatc 57
||||||||||||||||| ||||||||||||| ||||||| |||| ||| |||| | | |
Sbjct: 1 ttaaaattgaatggcgattgtcggtatggtcgctttttcacaaaaaaattggttaccaac 60
Query: 58 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 100
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 103
>36880_dpe-mir-286:mirbase
Length = 96
Score = 95.6 bits (48), Expect = 6e-21
Identities = 85/97 (87%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaaagaaaggtttcgatcaag 60
|||||||| |||||||| ||||||| ||||| |||||| | | | ||| ||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccagg----gttccgatcaag 56
Query: 61 cgaagtgactagaccgaacactcgtgctataatttta 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 57 cgaagtgactagaccgaacactcgtgctataatttta 93
>36961_dps-mir-286:mirbase
Length = 97
Score = 95.6 bits (48), Expect = 6e-21
Identities = 85/97 (87%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaaagaaaggtttcgatcaag 60
|||||||| |||||||| ||||||| ||||| |||||| | | | ||| ||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccagg----gttccgatcaag 56
Query: 61 cgaagtgactagaccgaacactcgtgctataatttta 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 57 cgaagtgactagaccgaacactcgtgctataatttta 93
>36296_dgr-mir-286-1:mirbase
Length = 104
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 63 aagtgactagaccgaacactcgtgctataattttaaaa 100
||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>36297_dgr-mir-286-2:mirbase
Length = 104
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 63 aagtgactagaccgaacactcgtgctataattttaaaa 100
||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>36804_dmo-mir-286:mirbase
Length = 103
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 63 aagtgactagaccgaacactcgtgctataattttaaaa 100
||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtgactagaccgaacactcgtgctataattttaaaa 103
Score = 61.9 bits (31), Expect = 8e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttc 39
|||||||| |||||||| |||||||||||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtctctttttc 39
>37381_dvi-mir-286:mirbase
Length = 101
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 63 aagtgactagaccgaacactcgtgctataattttaaaa 100
||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aagtgactagaccgaacactcgtgctataattttaaaa 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttc 39
|||||||| |||||||| ||||||||||||| |||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttc 39
>37460_dwi-mir-286:mirbase
Length = 108
Score = 71.9 bits (36), Expect = 8e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 63 aagtgactagaccgaacactcgtgctataattttaa 98
||||||||||||||||||||||||||||||||||||
Sbjct: 73 aagtgactagaccgaacactcgtgctataattttaa 108
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 3 aaaattgaatggcgaatgtcggtatggtctctttttccaaa 43
||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 1 aaaattgaatggcgattgtcggtatagtctctttttccaaa 41
>35216_aae-mir-286b-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcgt 85
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35217_aae-mir-286b-2:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcgt 85
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35215_aae-mir-286a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcg 84
|||||||||||||||||||||
Sbjct: 61 agtgactagaccgaacactcg 81
>35308_aga-mir-286:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcg 84
|||||||||||||||||||||
Sbjct: 59 agtgactagaccgaacactcg 79
