miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37170_dse-mir-289:mirbase
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
Query: 61 gggtaagtcacttgagcgtttgttggcacgtaaaag 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggtaagtcacttgagcgtttgttggcacgtaaaag 96
>36440_dme-mir-289:mirbase
Length = 99
Score = 182 bits (92), Expect = 3e-47
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2 agtttacagtaaaataaatatttaagtggagcctgcgacttcagtccctctgactgactg 61
Query: 61 gggtaagtcacttgagcgtttgttggcacgtaaaag 96
||||||||||||||||||||||||||||||||||||
Sbjct: 62 gggtaagtcacttgagcgtttgttggcacgtaaaag 97
>36210_der-mir-289:mirbase
Length = 96
Score = 174 bits (88), Expect = 7e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgacggactg 60
Query: 61 gggtaagtcacttgagcgtttgttggcacgtaaaag 96
|||||| |||||||||||||||||||||||||||||
Sbjct: 61 gggtaactcacttgagcgtttgttggcacgtaaaag 96
>37539_dya-mir-289:mirbase
Length = 96
Score = 174 bits (88), Expect = 7e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
Query: 61 gggtaagtcacttgagcgtttgttggcacgtaaaag 96
||||||||| || |||||||||||||||||||||||
Sbjct: 61 gggtaagtctctcgagcgtttgttggcacgtaaaag 96
>36883_dpe-mir-289:mirbase
Length = 97
Score = 89.7 bits (45), Expect = 3e-19
Identities = 85/97 (87%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgact-ccagtccctctgactgact 59
|||||||||| ||||||||||||||||||||||||||||| | ||| || | ||||
Sbjct: 1 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 60
Query: 60 ggggtaagtcacttgagcgtttgttggcacgtaaaag 96
||| ||| |||||||||||||||||||||||||||||
Sbjct: 61 gggctaactcacttgagcgtttgttggcacgtaaaag 97
>36964_dps-mir-289:mirbase
Length = 100
Score = 89.7 bits (45), Expect = 3e-19
Identities = 85/97 (87%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgact-ccagtccctctgactgact 59
|||||||||| ||||||||||||||||||||||||||||| | ||| || | ||||
Sbjct: 2 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 61
Query: 60 ggggtaagtcacttgagcgtttgttggcacgtaaaag 96
||| ||| |||||||||||||||||||||||||||||
Sbjct: 62 gggctaactcacttgagcgtttgttggcacgtaaaag 98
>36132_dan-mir-289:mirbase
Length = 117
Score = 81.8 bits (41), Expect = 8e-17
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgactc 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttacagtaaaataaatatttaagtggagcctgcgactc 42
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 66 agtcacttgagcgtttgttggcacgtaaaag 96
|||||||||||||||||||||||||||||||
Sbjct: 85 agtcacttgagcgtttgttggcacgtaaaag 115
