miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36445_dme-mir-305:mirbase
Length = 73
Score = 121 bits (61), Expect = 7e-29
Identities = 71/73 (97%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
Query: 60 tacactcaatatg 72
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36446_dme-mir-305:mirbase
Length = 73
Score = 121 bits (61), Expect = 7e-29
Identities = 71/73 (97%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
Query: 60 tacactcaatatg 72
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>37172_dse-mir-305:mirbase
Length = 73
Score = 121 bits (61), Expect = 7e-29
Identities = 71/73 (97%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtgtctcgtaacccggcacatgttgaag 60
Query: 60 tacactcaatatg 72
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36302_dgr-mir-305:mirbase
Length = 73
Score = 105 bits (53), Expect = 4e-24
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
|||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtcactcgtaacccggcacatgttgaag 60
Query: 60 tacactcaatatg 72
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36884_dpe-mir-305:mirbase
Length = 73
Score = 105 bits (53), Expect = 4e-24
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
|||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtgtcctgtaacccggcacatgttgaag 60
Query: 60 tacactcaatatg 72
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36966_dps-mir-305:mirbase
Length = 73
Score = 105 bits (53), Expect = 4e-24
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
|||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtgtcctgtaacccggcacatgttgaag 60
Query: 60 tacactcaatatg 72
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>37385_dvi-mir-305:mirbase
Length = 73
Score = 105 bits (53), Expect = 4e-24
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
|||||||||||||||||||||| |||||||||||| || ||||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtgacttgtaacccggcacatgttgaag 60
Query: 60 tacactcaatatg 72
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>37541_dya-mir-305:mirbase
Length = 73
Score = 105 bits (53), Expect = 4e-24
Identities = 69/73 (94%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
|||||||||||||||||||||| |||||||||||| | |||||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtggcccgtaacccggcacatgttgaag 60
Query: 60 tacactcaatatg 72
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36212_der-mir-305:mirbase
Length = 73
Score = 97.6 bits (49), Expect = 1e-21
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
|||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtggtccgtaacccggcacatgttgaag 60
Query: 60 tacactcaatatg 72
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36134_dan-mir-305:mirbase
Length = 73
Score = 89.7 bits (45), Expect = 2e-19
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
|||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtccaccgtaacccggcacatgttgaag 60
Query: 60 tacactcaatatg 72
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>36808_dmo-mir-305:mirbase
Length = 73
Score = 81.8 bits (41), Expect = 6e-17
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgtgtctcgtaacccggcacatgctgaag 59
|||||||||||||||||||||| ||||||||||| | | ||||||||||||| |||||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtcagtggaaacccggcacatgttgaag 60
Query: 60 tacactcaatatg 72
|||||||||||||
Sbjct: 61 tacactcaatatg 73
>37464_dwi-mir-305:mirbase
Length = 74
Score = 79.8 bits (40), Expect = 2e-16
Identities = 69/75 (92%), Gaps = 4/75 (5%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatcag-tgctctggtgt--gtctcgtaacccggcacatgctga 57
|||||||||||||||||||||| ||||||||||| || | ||||||||||||||| |||
Sbjct: 1 catgtctattgtacttcatcaggtgctctggtgtccgttt-gtaacccggcacatgttga 59
Query: 58 agtacactcaatatg 72
|||||||||||||||
Sbjct: 60 agtacactcaatatg 74
>35218_aae-mir-305:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 5e-08
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatca-gtgctctggtgtgtctcgtaacccggcacatgctgaag 59
||||||||||||||||||||| |||||||||| | ||| |||||||||||| || ||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggttgttttcgatacccggcacatgttggag 67
Query: 60 tacact 65
||||||
Sbjct: 68 tacact 73
>36041_cqu-mir-305:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 5e-08
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatca-gtgctctggtgtgtctcgtaacccggcacatgctgaag 59
||||||||||||||||||||| |||||||||| | ||| |||||||||||| || ||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggttgctttcgatacccggcacatgttggag 67
Query: 60 tacact 65
||||||
Sbjct: 68 tacact 73
>35309_aga-mir-305:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatca-gtgctctggtg 32
||||||||||||||||||||| |||||||||||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggtg 40
>37788_tca-mir-305:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 8e-07
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatca-gtgctctggt 31
||||||||||||||||||||| ||||||||||
Sbjct: 3 catgtctattgtacttcatcaggtgctctggt 34
>37789_tca-mir-305:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 8e-07
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 1 catgtctattgtacttcatca-gtgctctggt 31
||||||||||||||||||||| ||||||||||
Sbjct: 3 catgtctattgtacttcatcaggtgctctggt 34
