miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37177_dse-mir-310:mirbase
Length = 89
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 1 aacataaacatttgcaggacgggtcgtgtgtcagtatatttacttcttagctatattgca 60
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 1 aacataaacatttgcaggacgggtcgtgtgtcagtgtatttacttcttaactatattgca 60
Query: 61 cacttcccggcctttaaatgtccaatgtt 89
|||||||||||||||||||||||||||||
Sbjct: 61 cacttcccggcctttaaatgtccaatgtt 89
>36457_dme-mir-310:mirbase
Length = 89
Score = 145 bits (73), Expect = 6e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 aacataaacatttgcaggacgggtcgtgtgtcagtatatttacttcttagctatattgca 60
|||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||
Sbjct: 1 aacataaacatttgcagggcgggtcgtgtgtcagtgtatttatatcttagctatattgca 60
Query: 61 cacttcccggcctttaaatgtccaatgtt 89
|||||||||||||||||||||||||||||
Sbjct: 61 cacttcccggcctttaaatgtccaatgtt 89
>36458_dme-mir-310:mirbase
Length = 89
Score = 145 bits (73), Expect = 6e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 aacataaacatttgcaggacgggtcgtgtgtcagtatatttacttcttagctatattgca 60
|||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||
Sbjct: 1 aacataaacatttgcagggcgggtcgtgtgtcagtgtatttatatcttagctatattgca 60
Query: 61 cacttcccggcctttaaatgtccaatgtt 89
|||||||||||||||||||||||||||||
Sbjct: 61 cacttcccggcctttaaatgtccaatgtt 89
>37546_dya-mir-310:mirbase
Length = 88
Score = 119 bits (60), Expect = 3e-28
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 6 aaacatttgcaggacgggtcgtgtgtcagtatatttacttcttagctatattgcacactt 65
||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||
Sbjct: 5 aaacatttgcaggacgggtcgtgtggcagtgtattgatttcttagctatattgcacactt 64
Query: 66 cccggcctttaaatgtccaatgtt 89
|||| |||||||||||||| ||||
Sbjct: 65 cccgccctttaaatgtccagtgtt 88
>36217_der-mir-310a:mirbase
Length = 88
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 10 atttgcaggacgggtcgtgtgtcagtatatttacttcttagctatattgcacacttcccg 69
|||||||||||||||||||||||| | |||| | |||||||||||||||||||||||||
Sbjct: 9 atttgcaggacgggtcgtgtgtcaatgtattgatctcttagctatattgcacacttcccg 68
Query: 70 gcctttaaatgtccaatgtt 89
|||||||||||||| ||||
Sbjct: 69 ccctttaaatgtccagtgtt 88
>36218_der-mir-310b:mirbase
Length = 88
Score = 71.9 bits (36), Expect = 7e-14
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 10 atttgcaggacgggtcgtgtgtcagtatatttacttcttagctatattgcacacttcccg 69
|||||||||||||||||||||| | | ||| | | |||||||||||||||||||||||
Sbjct: 9 atttgcaggacgggtcgtgtgttaatgtataaatctattagctatattgcacacttcccg 68
Query: 70 gcctttaaatgtccaatgtt 89
||||||||||||| ||||
Sbjct: 69 ctctttaaatgtccagtgtt 88
