miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37179_dse-mir-312:mirbase
Length = 66
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 gttttggttcgtcacaagggcaattctgcatttttaaacttgtattgcacttgagacggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttttggttcgtcacaagggcaattctgcatttttaaacttgtattgcacttgagacggc 60
Query: 61 cgaatt 66
||||||
Sbjct: 61 cgaatt 66
>36461_dme-mir-312:mirbase
Length = 66
Score = 101 bits (51), Expect = 6e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 3 tttggttcgtcacaagggcaattctgcatttttaaacttgtattgcacttgagacggcc 61
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 3 tttggttcgtcacaagggcaattctgcattttttaactagtattgcacttgagacggcc 61
>36462_dme-mir-312:mirbase
Length = 66
Score = 101 bits (51), Expect = 6e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 3 tttggttcgtcacaagggcaattctgcatttttaaacttgtattgcacttgagacggcc 61
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 3 tttggttcgtcacaagggcaattctgcattttttaactagtattgcacttgagacggcc 61
>36223_der-mir-312-1:mirbase
Length = 66
Score = 69.9 bits (35), Expect = 2e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 20 gcaattctgcatttttaaacttgtattgcacttgagacggccg 62
|||||||||||||||||| || |||||||||||||||||||||
Sbjct: 20 gcaattctgcatttttaagctagtattgcacttgagacggccg 62
>37549_dya-mir-312:mirbase
Length = 67
Score = 52.0 bits (26), Expect = 5e-08
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 6 ggttcgtcacaagggcaattctgcatttttaaa-cttgtattgcacttgagacggccg 62
|||||||| || | ||||||||||| | ||||| || |||||||||||||||||||||
Sbjct: 6 ggttcgtcccaggagcaattctgcactattaaagctagtattgcacttgagacggccg 63
>36224_der-mir-312-2:mirbase
Length = 69
Score = 48.1 bits (24), Expect = 7e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 31 tttttaaacttgtattgcacttgagacggccg 62
||||||| || |||||||||||||||||||||
Sbjct: 34 tttttaagctagtattgcacttgagacggccg 65
>36142_dan-mir-312:mirbase
Length = 57
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 42 gtattgcacttgagacggcc 61
||||||||||||||||||||
Sbjct: 38 gtattgcacttgagacggcc 57
