miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37181_dse-mir-314:mirbase
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36225_der-mir-314:mirbase
Length = 90
Score = 155 bits (78), Expect = 6e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37550_dya-mir-314:mirbase
Length = 90
Score = 155 bits (78), Expect = 6e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaaccccatgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36465_dme-mir-314:mirbase
Length = 90
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36466_dme-mir-314:mirbase
Length = 90
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37470_dwi-mir-314:mirbase
Length = 90
Score = 139 bits (70), Expect = 4e-34
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||||| | | ||| |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaattcaatgttggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36143_dan-mir-314:mirbase
Length = 88
Score = 123 bits (62), Expect = 2e-29
Identities = 85/90 (94%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||||| | | || | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaat-cagt-ttggattttgt 58
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 59 tacctctggtattcgagccaataagttcgg 88
>36889_dpe-mir-314:mirbase
Length = 89
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaact-ccgaaatggattttgt 59
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 60 tacctctggtattcgagccaataagttcgg 89
>36973_dps-mir-314:mirbase
Length = 89
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaact-ccgaaatggattttgt 59
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 60 tacctctggtattcgagccaataagttcgg 89
>37392_dvi-mir-314:mirbase
Length = 91
Score = 67.9 bits (34), Expect = 1e-12
Identities = 82/93 (88%), Gaps = 5/93 (5%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaa--aagtcc-cgtgtcggattt 57
|||||||||||||||||| |||||||||| ||||||||| || || ||| | ||||||
Sbjct: 1 tcgtaacttgtgtggctt-gaatgtacctggttgaggaacgaattcaacgttt-ggattt 58
Query: 58 tgttacctctggtattcgagccaataagttcgg 90
|||| ||| ||||||||||||||||||||||||
Sbjct: 59 tgttgcctttggtattcgagccaataagttcgg 91
>36814_dmo-mir-314:mirbase
Length = 95
Score = 60.0 bits (30), Expect = 3e-10
Identities = 80/95 (84%), Gaps = 5/95 (5%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgag-gaaaag----tcccgtgtcggat 55
||||||||||||||||||||||||||||| || ||| |||||| | | ||| ||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctcgtcgagcgaaaagcgaattcattgttggat 60
Query: 56 tttgttacctctggtattcgagccaataagttcgg 90
|||||| | ||||||||||||||||||||||||
Sbjct: 61 tttgttgctcttggtattcgagccaataagttcgg 95
>36308_dgr-mir-314:mirbase
Length = 76
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 ggtattcgagccaataagttcgg 90
|||||||||||||||||||||||
Sbjct: 54 ggtattcgagccaataagttcgg 76
