miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36477_dme-mir-927:mirbase
Length = 92
Score = 165 bits (83), Expect = 7e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 6 tgctgtagagttttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tgctgtagagttttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtt 64
Query: 66 tggattctgaaaccctatcgatccatt 92
||||||||||||||||| |||||||||
Sbjct: 65 tggattctgaaaccctaccgatccatt 91
>36478_dme-mir-927:mirbase
Length = 92
Score = 165 bits (83), Expect = 7e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 6 tgctgtagagttttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tgctgtagagttttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtt 64
Query: 66 tggattctgaaaccctatcgatccatt 92
||||||||||||||||| |||||||||
Sbjct: 65 tggattctgaaaccctaccgatccatt 91
>36979_dps-mir-927:mirbase
Length = 88
Score = 111 bits (56), Expect = 9e-26
Identities = 72/76 (94%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 9 tgtagagttttagaattcctacgctttaccgtggcata-cgaaattcggcaaagcgtttg 67
||||| |||||||||||||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 7 tgtagtgttttagaattcctacgctttaccgttgcaaaacgaaattcggcaaagcgtttg 66
Query: 68 gattctgaaaccctat 83
||||||||||||||||
Sbjct: 67 gattctgaaaccctat 82
>35571_bmo-mir-927:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 7e-08
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 17 tttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtttggattctgaa 76
|||||||||||||||||||||||| || | | | || ||||||||||||||||||| ||
Sbjct: 15 tttagaattcctacgctttaccgttgc-caagtagttgggcaaagcgtttggattctaaa 73
Query: 77 ac 78
||
Sbjct: 74 ac 75
>35585_bmo-mir-1926:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 17 tttagaattcctacgctttaccgtggcatacgaaattcggcaaagcgtttggattctgaa 76
|||||||||||||||||||||||| || | | | || ||||||||||||||||||| ||
Sbjct: 75 tttagaattcctacgctttaccgttgc-caagtagttgggcaaagcgtttggattctaaa 17
Query: 77 ac 78
||
Sbjct: 16 ac 15
>35230_aae-mir-927:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tttagaattcctacgctttaccgtg 41
|||||||||||||||||||||||||
Sbjct: 8 tttagaattcctacgctttaccgtg 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 ggcaaagcgtttggattctgaaac 78
|||||||||||||| |||||||||
Sbjct: 48 ggcaaagcgtttgggttctgaaac 71
>35318_aga-mir-927:mirbase
Length = 93
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 54 cggcaaagcgtttggattctgaaac 78
|||||||||||||||||||||||||
Sbjct: 54 cggcaaagcgtttggattctgaaac 78
>35398_ame-mir-927:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gttttagaattcctacgctttaccg 39
|||||||||||||||||||||||||
Sbjct: 20 gttttagaattcctacgctttaccg 44
>37594_ngi-mir-927:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gttttagaattcctacgctttaccg 39
|||||||||||||||||||||||||
Sbjct: 20 gttttagaattcctacgctttaccg 44
>37624_nlo-mir-927:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gttttagaattcctacgctttaccg 39
|||||||||||||||||||||||||
Sbjct: 20 gttttagaattcctacgctttaccg 44
>37671_nvi-mir-927:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gttttagaattcctacgctttaccg 39
|||||||||||||||||||||||||
Sbjct: 20 gttttagaattcctacgctttaccg 44
>37807_tca-mir-927:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tttagaattcctacgctttaccgtg 41
|||||||||||||||||||||||||
Sbjct: 7 tttagaattcctacgctttaccgtg 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 ggcaaagcgtttggattctgaa 76
||||||||||||||||||||||
Sbjct: 41 ggcaaagcgtttggattctgaa 62
>37808_tca-mir-927:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tttagaattcctacgctttaccgtg 41
|||||||||||||||||||||||||
Sbjct: 7 tttagaattcctacgctttaccgtg 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 ggcaaagcgtttggattctgaa 76
||||||||||||||||||||||
Sbjct: 41 ggcaaagcgtttggattctgaa 62
>35088_api-mir-927:mirbase
Length = 59
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tttagaattcctacgctttaccgt 40
||||||||||||||||||||||||
Sbjct: 1 tttagaattcctacgctttaccgt 24
