miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36515_dme-mir-970:mirbase
Length = 95
Score = 159 bits (80), Expect = 5e-40
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 15 aaggcatctgttgcagctagcgggtgttttatttggtagctgaattgatttgaatctatc 74
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 3 aaggcatctgttgcagctagcgggtgttttatttggtagctgtaatgatttgaatctatc 62
Query: 75 ataagacacacgcggctataaccgatgtctaa 106
|||||||||||||||||||||||| |||||||
Sbjct: 63 ataagacacacgcggctataaccgttgtctaa 94
>36516_dme-mir-970:mirbase
Length = 95
Score = 159 bits (80), Expect = 5e-40
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 15 aaggcatctgttgcagctagcgggtgttttatttggtagctgaattgatttgaatctatc 74
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 3 aaggcatctgttgcagctagcgggtgttttatttggtagctgtaatgatttgaatctatc 62
Query: 75 ataagacacacgcggctataaccgatgtctaa 106
|||||||||||||||||||||||| |||||||
Sbjct: 63 ataagacacacgcggctataaccgttgtctaa 94
>36989_dps-mir-970:mirbase
Length = 88
Score = 113 bits (57), Expect = 3e-26
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 17 ggcatctgttgcagctagcgggtgttttatttggtagctgaattgatttgaatctatcat 76
|||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||
Sbjct: 1 ggcatctgttgcagctagcgggtgttttatctggtagctgtacccttttgaatctatcat 60
Query: 77 aagacacacgcggctataaccgatg 101
||||||||||||||||| |||||||
Sbjct: 61 aagacacacgcggctatgaccgatg 85
>35575_bmo-mir-970:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 67 aatctatcataagacacacgcggct 91
|||||||||||||||||||||||||
Sbjct: 52 aatctatcataagacacacgcggct 76
>37815_tca-mir-970:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 70 ctatcataagacacacgcggctat 93
||||||||||||||||||||||||
Sbjct: 54 ctatcataagacacacgcggctat 77
>37816_tca-mir-970:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 70 ctatcataagacacacgcggctat 93
||||||||||||||||||||||||
Sbjct: 54 ctatcataagacacacgcggctat 77
>35236_aae-mir-970:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tatcataagacacacgcggctat 93
|||||||||||||||||||||||
Sbjct: 63 tatcataagacacacgcggctat 85
>35323_aga-mir-970:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tatcataagacacacgcggctat 93
|||||||||||||||||||||||
Sbjct: 62 tatcataagacacacgcggctat 84
>36052_cqu-mir-970:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tatcataagacacacgcggctat 93
|||||||||||||||||||||||
Sbjct: 52 tatcataagacacacgcggctat 74
