miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36539_dme-mir-982:mirbase
          Length = 93

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                      
Query: 11 cgaaatcatgcgagatcttggacaaatatcaagtagattattattatacatcaatttatt 70
          ||||||||||  ||||| ||||||||||| ||||| ||| || |||| ||||||||  ||
Sbjct: 1  cgaaatcatgttagatcctggacaaatatgaagtaaattgtttttatgcatcaattactt 60

                                       
Query: 71 gttatttgtccttgaacttaattgtttta 99
          | ||||  |||||||||| ||| ||||||
Sbjct: 61 gatattcatccttgaactaaatggtttta 89




>36540_dme-mir-982:mirbase
          Length = 93

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                      
Query: 11 cgaaatcatgcgagatcttggacaaatatcaagtagattattattatacatcaatttatt 70
          ||||||||||  ||||| ||||||||||| ||||| ||| || |||| ||||||||  ||
Sbjct: 1  cgaaatcatgttagatcctggacaaatatgaagtaaattgtttttatgcatcaattactt 60

                                       
Query: 71 gttatttgtccttgaacttaattgtttta 99
          | ||||  |||||||||| ||| ||||||
Sbjct: 61 gatattcatccttgaactaaatggtttta 89




>37288_dsi-mir-982b:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                   
Query: 1  agttaaaaaacgaaatcatgcgagatcttggacaaatatca 41
          ||||||||||| ||||||||| |||||  | ||||||||||
Sbjct: 1  agttaaaaaacaaaatcatgctagatcaagaacaaatatca 41