miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36567_dme-mir-995:mirbase
          Length = 90

 Score =  139 bits (70), Expect = 5e-34
 Identities = 85/90 (94%)
 Strand = Plus / Plus

                                                                       
Query: 17  cacctgtaccccgcagcccgaattatgtgggagctgcgccgtttccaaagtccgtagcac 76
           |||||| |||||||||||||||||||||||||||||||||||||||  | ||||||||||
Sbjct: 1   cacctgcaccccgcagcccgaattatgtgggagctgcgccgtttccgtaatccgtagcac 60

                                         
Query: 77  cacatgattcggcttcgtggtgcaggatat 106
           ||||||||||||||||||||| ||||||||
Sbjct: 61  cacatgattcggcttcgtggtacaggatat 90




>36568_dme-mir-995:mirbase
          Length = 90

 Score =  139 bits (70), Expect = 5e-34
 Identities = 85/90 (94%)
 Strand = Plus / Plus

                                                                       
Query: 17  cacctgtaccccgcagcccgaattatgtgggagctgcgccgtttccaaagtccgtagcac 76
           |||||| |||||||||||||||||||||||||||||||||||||||  | ||||||||||
Sbjct: 1   cacctgcaccccgcagcccgaattatgtgggagctgcgccgtttccgtaatccgtagcac 60

                                         
Query: 77  cacatgattcggcttcgtggtgcaggatat 106
           ||||||||||||||||||||| ||||||||
Sbjct: 61  cacatgattcggcttcgtggtacaggatat 90




>36999_dps-mir-995:mirbase
          Length = 85

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 68 ccgtagcaccacatgattcggcttcgtggt 97
          ||||||||||||||||||||||| ||||||
Sbjct: 52 ccgtagcaccacatgattcggctgcgtggt 81