miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36253_dgr-mir-8:mirbase
Length = 91
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
Query: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
|||||||||||||||||||||||||||||||
Sbjct: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
>36763_dmo-mir-8:mirbase
Length = 90
Score = 155 bits (78), Expect = 6e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 2 aggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaata 61
||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||
Sbjct: 1 aggacatctgttcacatcttaccgggcagcattagattcctgttttaaataactctaata 60
Query: 62 ctgtcaggtaaagatgtcgtccgtgtcctt 91
||||||||||||||||||||||||||||||
Sbjct: 61 ctgtcaggtaaagatgtcgtccgtgtcctt 90
>36165_der-mir-8:mirbase
Length = 87
Score = 121 bits (61), Expect = 9e-29
Identities = 85/91 (93%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
|||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctt--ttt--ataactctaat 56
Query: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
|||||||||||||||||||||||||||||||
Sbjct: 57 actgtcaggtaaagatgtcgtccgtgtcctt 87
>36345_dme-mir-8:mirbase
Length = 87
Score = 121 bits (61), Expect = 9e-29
Identities = 85/91 (93%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
|||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctt--ttt--ataactctaat 56
Query: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
|||||||||||||||||||||||||||||||
Sbjct: 57 actgtcaggtaaagatgtcgtccgtgtcctt 87
>36346_dme-mir-8:mirbase
Length = 87
Score = 121 bits (61), Expect = 9e-29
Identities = 85/91 (93%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
|||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctt--ttt--ataactctaat 56
Query: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
|||||||||||||||||||||||||||||||
Sbjct: 57 actgtcaggtaaagatgtcgtccgtgtcctt 87
>37125_dse-mir-8:mirbase
Length = 87
Score = 121 bits (61), Expect = 9e-29
Identities = 85/91 (93%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
|||||||||||||||||||||||||||||||||||||| ||| ||||| || ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctt--tttaa--aactctaat 56
Query: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
|||||||||||||||||||||||||||||||
Sbjct: 57 actgtcaggtaaagatgtcgtccgtgtcctt 87
>37203_dsi-mir-8:mirbase
Length = 87
Score = 121 bits (61), Expect = 9e-29
Identities = 85/91 (93%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
|||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctt--ttt--ataactctaat 56
Query: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
|||||||||||||||||||||||||||||||
Sbjct: 57 actgtcaggtaaagatgtcgtccgtgtcctt 87
>37493_dya-mir-8:mirbase
Length = 87
Score = 121 bits (61), Expect = 9e-29
Identities = 85/91 (93%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
|||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctt--ttt--ataactctaat 56
Query: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
|||||||||||||||||||||||||||||||
Sbjct: 57 actgtcaggtaaagatgtcgtccgtgtcctt 87
>36836_dpe-mir-8:mirbase
Length = 87
Score = 115 bits (58), Expect = 6e-27
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
|||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcc----tttagatacctctaat 56
Query: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
|||||||||||||||||||||||||||||||
Sbjct: 57 actgtcaggtaaagatgtcgtccgtgtcctt 87
>36912_dps-mir-8:mirbase
Length = 87
Score = 115 bits (58), Expect = 6e-27
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
|||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcc----tttagatacctctaat 56
Query: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
|||||||||||||||||||||||||||||||
Sbjct: 57 actgtcaggtaaagatgtcgtccgtgtcctt 87
>36087_dan-mir-8:mirbase
Length = 88
Score = 113 bits (57), Expect = 2e-26
Identities = 83/91 (91%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
|||||||||||||||||||||||||||||||||||||| || || |||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcct---ttctgataactctaat 57
Query: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
|||||||||||||||||||||||||||||||
Sbjct: 58 actgtcaggtaaagatgtcgtccgtgtcctt 88
>37414_dwi-mir-8:mirbase
Length = 92
Score = 111 bits (56), Expect = 9e-26
Identities = 84/92 (91%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattct-tgatttaaataattctaa 59
||||||||||||||||||||||||||||||||||||||| | | | || ||| |||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
Query: 60 tactgtcaggtaaagatgtcgtccgtgtcctt 91
||||||||||||||||||||||||||||||||
Sbjct: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
>36006_cqu-mir-8:mirbase
Length = 77
Score = 107 bits (54), Expect = 1e-24
Identities = 72/77 (93%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattagattcttgatttaaataattctaatactgtca 67
||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagatattt--tttaaatacttctaatactgtca 59
Query: 68 ggtaaagatgtcgtccg 84
|||||||||||||||||
Sbjct: 60 ggtaaagatgtcgtccg 76
>35171_aae-mir-8:mirbase
Length = 79
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/77 (92%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattagattcttgatttaaataattctaatactgtca 67
||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagatattt--ttgaaatacttctaatactgtca 59
Query: 68 ggtaaagatgtcgtccg 84
|||||||||||||||||
Sbjct: 60 ggtaaagatgtcgtccg 76
>35274_aga-mir-8:mirbase
Length = 86
Score = 73.8 bits (37), Expect = 2e-14
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattagattcttgatttaaataattctaatactgtca 67
||||||||||||||||||||||||||||||| | | | ||| ||||||||||||||
Sbjct: 6 tctgttcacatcttaccgggcagcattagatatgtta-tcggatatttctaatactgtca 64
Query: 68 ggtaaagatgtcgtccg 84
|||||||||||||||||
Sbjct: 65 ggtaaagatgtcgtccg 81
>37602_nlo-mir-8:mirbase
Length = 86
Score = 73.8 bits (37), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagattcttgatttaaataattctaatactgtc 66
||||||| |||||||||||||||||||||||| | |||| ||| |||||||||||||
Sbjct: 6 atctgtttacatcttaccgggcagcattagat--tacatttgaat-tttctaatactgtc 62
Query: 67 aggtaaagatgtcgtc 82
||||||||||||||||
Sbjct: 63 aggtaaagatgtcgtc 78
>37635_nvi-mir-8:mirbase
Length = 86
Score = 73.8 bits (37), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagattcttgatttaaataattctaatactgtc 66
||||||| |||||||||||||||||||||||| | |||| ||| |||||||||||||
Sbjct: 6 atctgtttacatcttaccgggcagcattagat--tacatttgaat-tttctaatactgtc 62
Query: 67 aggtaaagatgtcgtc 82
||||||||||||||||
Sbjct: 63 aggtaaagatgtcgtc 78
>35518_bmo-mir-8:mirbase
Length = 102
Score = 67.9 bits (34), Expect = 1e-12
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 11 gttcacatcttaccgggcagcattagattcttgatttaaataattctaatactgtcaggt 70
|||| |||||||||||||||||||||| || || | || || |||||||||||||||||
Sbjct: 16 gttcgcatcttaccgggcagcattagagtcctg-tctatatt-ttctaatactgtcaggt 73
Query: 71 aaagatgtcgtccg 84
||||||||||||||
Sbjct: 74 aaagatgtcgtccg 87
>35344_ame-mir-8:mirbase
Length = 85
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagatt 39
|||||||||||||||||||||||||||||||||
Sbjct: 6 atctgttcacatcttaccgggcagcattagatt 38
>37695_tca-mir-8:mirbase
Length = 73
Score = 63.9 bits (32), Expect = 2e-11
Identities = 63/71 (88%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 9 ctgttcacatcttaccgggcagcattagattcttgatttaaataattctaatactgtcag 68
||||| |||||||||||||||||||||||| | |||| ||| |||||||||||||||
Sbjct: 2 ctgttaacatcttaccgggcagcattagat--tacattt-tatacttctaatactgtcag 58
Query: 69 gtaaagatgtc 79
|||||||||||
Sbjct: 59 gtaaagatgtc 69
>37696_tca-mir-8:mirbase
Length = 73
Score = 63.9 bits (32), Expect = 2e-11
Identities = 63/71 (88%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 9 ctgttcacatcttaccgggcagcattagattcttgatttaaataattctaatactgtcag 68
||||| |||||||||||||||||||||||| | |||| ||| |||||||||||||||
Sbjct: 2 ctgttaacatcttaccgggcagcattagat--tacattt-tatacttctaatactgtcag 58
Query: 69 gtaaagatgtc 79
|||||||||||
Sbjct: 59 gtaaagatgtc 69
>34999_dpu-mir-8:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 54 ttctaatactgtcaggtaaagatgtcgtccgtg 86
|||||||||||||||||||||||||| ||||||
Sbjct: 58 ttctaatactgtcaggtaaagatgtcctccgtg 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 catcttaccgggcagcattagatt 39
||||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagatt 33
>38851_lgi-mir-8:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 ttctaatactgtcaggtaaagatgtc 79
||||||||||||||||||||||||||
Sbjct: 58 ttctaatactgtcaggtaaagatgtc 83
>38728_cte-mir-8:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 ttctaatactgtcaggtaaagatgtc 79
||||||||||||||||||||||||||
Sbjct: 57 ttctaatactgtcaggtaaagatgtc 82
>34963_isc-mir-8:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 ttctaatactgtcaggtaaagatgtc 79
||||||||||||||||||||||||||
Sbjct: 55 ttctaatactgtcaggtaaagatgtc 80
>37561_lmi-mir-8:mirbase
Length = 61
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 catcttaccgggcagcattagatt 39
||||||||||||||||||||||||
Sbjct: 1 catcttaccgggcagcattagatt 24
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 ttctaatactgtcaggtaaagatgtc 79
||||||||||||||||||| ||||||
Sbjct: 36 ttctaatactgtcaggtaacgatgtc 61
>35047_api-mir-8:mirbase
Length = 63
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 55 tctaatactgtcaggtaaagatgtc 79
|||||||||||||||||| ||||||
Sbjct: 39 tctaatactgtcaggtaatgatgtc 63
>38969_sja-mir-8:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 ttctaatactgtcaggtaaagatg 77
|||||||||||| |||||||||||
Sbjct: 41 ttctaatactgttaggtaaagatg 64
>38968_sja-mir-8:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 ttctaatactgtcaggtaaagatg 77
|||||||||||| |||||||||||
Sbjct: 41 ttctaatactgttaggtaaagatg 64
