miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36291_dgr-mir-281-2:mirbase
Length = 93
Score = 147 bits (74), Expect = 2e-36
Identities = 89/93 (95%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagctataca--gattgtaatac 58
|||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagttatataccgattgtaatac 60
Query: 59 tgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatggaattgctctctttgtataatattcg 93
>36876_dpe-mir-281-2:mirbase
Length = 91
Score = 141 bits (71), Expect = 1e-34
Identities = 86/91 (94%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagctatacagattgtaatactg 60
||||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 1 cgaatagtgaaataaagagagctatccgtcgacagtcaagttaatcagattgtaatactg 60
Query: 61 tcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||
Sbjct: 61 tcatggaattgctctctttgtataatattcg 91
>36956_dps-mir-281-2:mirbase
Length = 91
Score = 141 bits (71), Expect = 1e-34
Identities = 86/91 (94%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagctatacagattgtaatactg 60
||||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 1 cgaatagtgaaataaagagagctatccgtcgacagtcaagttaatcagattgtaatactg 60
Query: 61 tcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||
Sbjct: 61 tcatggaattgctctctttgtataatattcg 91
>36799_dmo-mir-281-2:mirbase
Length = 93
Score = 139 bits (70), Expect = 4e-34
Identities = 88/93 (94%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagctata--cagattgtaatac 58
|||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagttatatacatattttaatac 60
Query: 59 tgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatggaattgctctctttgtataatattcg 93
>37531_dya-mir-281-2:mirbase
Length = 92
Score = 135 bits (68), Expect = 6e-33
Identities = 87/92 (94%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagcta-tacagattgtaatact 59
||||||| |||||||||||||||||||||||||||||||| || ||| |||||||||||
Sbjct: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaataccaattgtaatact 60
Query: 60 gtcatggaattgctctctttgtataatattcg 91
||||||||||||||||||||||||||||||||
Sbjct: 61 gtcatggaattgctctctttgtataatattcg 92
>36202_der-mir-281-2:mirbase
Length = 92
Score = 127 bits (64), Expect = 1e-30
Identities = 80/84 (95%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtcaagcta-tacagattgtaatactgtcatgga 67
|||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtcaagttaataccgattgtaatactgtcatgga 68
Query: 68 attgctctctttgtataatattcg 91
|||||||||||||||||| |||||
Sbjct: 69 attgctctctttgtataacattcg 92
>36124_dan-mir-281-2:mirbase
Length = 94
Score = 119 bits (60), Expect = 4e-28
Identities = 86/94 (91%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagctata---cagattgtaata 57
||||||| |||||||||||||||||||||||||||||||| || | | ||||||||||
Sbjct: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
Query: 58 ctgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||| |||||
Sbjct: 61 ctgtcatggaattgctctctttgtataacattcg 94
>36426_dme-mir-281-2:mirbase
Length = 92
Score = 119 bits (60), Expect = 4e-28
Identities = 79/84 (94%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtcaagctat-acagattgtaatactgtcatgga 67
|||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtcaagttaagaccgattgtaatactgtcatgga 68
Query: 68 attgctctctttgtataatattcg 91
|||||||||||||||||| |||||
Sbjct: 69 attgctctctttgtataacattcg 92
>36427_dme-mir-281-2:mirbase
Length = 92
Score = 119 bits (60), Expect = 4e-28
Identities = 79/84 (94%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtcaagctat-acagattgtaatactgtcatgga 67
|||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtcaagttaagaccgattgtaatactgtcatgga 68
Query: 68 attgctctctttgtataatattcg 91
|||||||||||||||||| |||||
Sbjct: 69 attgctctctttgtataacattcg 92
>37162_dse-mir-281-2:mirbase
Length = 92
Score = 119 bits (60), Expect = 4e-28
Identities = 79/84 (94%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtcaagctat-acagattgtaatactgtcatgga 67
|||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtcaagttaagaccgattgtaatactgtcatgga 68
Query: 68 attgctctctttgtataatattcg 91
|||||||||||||||||| |||||
Sbjct: 69 attgctctctttgtataacattcg 92
>37455_dwi-mir-281-2:mirbase
Length = 97
Score = 113 bits (57), Expect = 2e-26
Identities = 88/97 (90%), Gaps = 6/97 (6%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagct--atacag----attgta 54
||||||||||||||||||||||||||||||||||||| || | ||||| ||||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgta 60
Query: 55 atactgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 atactgtcatggaattgctctctttgtataatattcg 97
>36798_dmo-mir-281-1:mirbase
Length = 88
Score = 85.7 bits (43), Expect = 5e-18
Identities = 69/77 (89%), Gaps = 3/77 (3%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagctatacagattgtaatactgtcatggaattgctc 74
||||||||| ||||||||||||| || || ||||||||| ||||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccag---taaagattgtaaaactgtcatggaattgctc 71
Query: 75 tctttgtataatattcg 91
||||||||| |||||||
Sbjct: 72 tctttgtatgatattcg 88
>37454_dwi-mir-281-1:mirbase
Length = 90
Score = 81.8 bits (41), Expect = 8e-17
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagctatacagattgtaatactgtcatggaattgctc 74
||||||||| ||||||||||||| || || || |||| ||| ||||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccagttaaac-gattttaaaactgtcatggaattgctc 73
Query: 75 tctttgtataatattcg 91
||||||||| |||||||
Sbjct: 74 tctttgtatgatattcg 90
>36290_dgr-mir-281-1:mirbase
Length = 88
Score = 77.8 bits (39), Expect = 1e-15
Identities = 68/77 (88%), Gaps = 3/77 (3%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagctatacagattgtaatactgtcatggaattgctc 74
||||||||| ||||||||||||| || || | ||| ||||||||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccag---tataaattttaatactgtcatggaattgctc 71
Query: 75 tctttgtataatattcg 91
||||||||| |||||||
Sbjct: 72 tctttgtatgatattcg 88
>36875_dpe-mir-281-1:mirbase
Length = 88
Score = 77.8 bits (39), Expect = 1e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 53 taatactgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||||||||
Sbjct: 50 taatactgtcatggaattgctctctttgtataatattcg 88
>36955_dps-mir-281-1:mirbase
Length = 88
Score = 77.8 bits (39), Expect = 1e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 53 taatactgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||||||||
Sbjct: 50 taatactgtcatggaattgctctctttgtataatattcg 88
>37375_dvi-mir-281-1:mirbase
Length = 88
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 51 tgtaatactgtcatggaattgctctctttgtataatattcg 91
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 48 tgtaatactgtcatggaattgctctctttgtatgatattcg 88
>36123_dan-mir-281-1:mirbase
Length = 86
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||||
Sbjct: 52 actgtcatggaattgctctctttgtataatattcg 86
>36201_der-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>36424_dme-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>36425_dme-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37161_dse-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37238_dsi-mir-281:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37530_dya-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctctttgtataatattcg 91
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37781_tca-mir-281:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||||||||||||||||||||||||||
Sbjct: 5 aaatgaagagagctatccgtcgacagt 31
>37782_tca-mir-281:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||||||||||||||||||||||||||
Sbjct: 5 aaatgaagagagctatccgtcgacagt 31
>35557_bmo-mir-281:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 aatgaagagagctatccgtcgacagt 36
||||||||||||||||||||||||||
Sbjct: 7 aatgaagagagctatccgtcgacagt 32
>25355_odi-mir-281:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 54 aatactgtcatggaattgctctctt 78
|||||||||||||||||||||||||
Sbjct: 61 aatactgtcatggaattgctctctt 85
>35210_aae-mir-281:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 16 aaataaagagagctatccgtcgacagt 42
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctcttt 79
|||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78
>35305_aga-mir-281:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 15 aaataaagagagctatccgtcgacagt 41
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctcttt 79
|||||||||||||||||||||||
Sbjct: 55 actgtcatggaattgctctcttt 77
>36038_cqu-mir-281:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 21 aaataaagagagctatccgtcgacagt 47
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctcttt 79
|||||||||||||||||||||||
Sbjct: 61 actgtcatggaattgctctcttt 83
>38122_bma-mir-281:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctcttt 79
|||||||||||||||||||||||
Sbjct: 51 actgtcatggaattgctctcttt 73
>38884_lgi-mir-281:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 aatactgtcatggaattgctctcttt 79
|||||||||||||| |||||||||||
Sbjct: 56 aatactgtcatggagttgctctcttt 81
>35081_api-mir-281:mirbase
Length = 62
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagt 36
||||||||||||||||||||||
Sbjct: 1 aagagagctatccgtcgacagt 22
>35386_ame-mir-281:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctctttgta 82
||||||||||| ||||||||||||||
Sbjct: 59 actgtcatggagttgctctctttgta 84
>37566_lmi-mir-281:mirbase
Length = 58
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagt 36
||||||||||||||||||||||
Sbjct: 1 aagagagctatccgtcgacagt 22
>37589_ngi-mir-281:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctctttgt 81
||||||||||| |||||||||||||
Sbjct: 45 actgtcatggacttgctctctttgt 69
>37620_nlo-mir-281:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctctttgt 81
||||||||||| |||||||||||||
Sbjct: 45 actgtcatggacttgctctctttgt 69
>37663_nvi-mir-281:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 actgtcatggaattgctctctttgt 81
||||||||||| |||||||||||||
Sbjct: 59 actgtcatggacttgctctctttgt 83
