miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36294_dgr-mir-284:mirbase
Length = 98
Score = 174 bits (88), Expect = 8e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
>36802_dmo-mir-284:mirbase
Length = 98
Score = 147 bits (74), Expect = 2e-36
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||| |||
Sbjct: 1 gttgcagttcctggaataaagttgactgtgtcgcctgtaaggggaaggcttttgcattgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaactgcggccc 98
>36879_dpe-mir-284:mirbase
Length = 98
Score = 139 bits (70), Expect = 4e-34
Identities = 91/98 (92%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
|| |||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>36959_dps-mir-284:mirbase
Length = 100
Score = 139 bits (70), Expect = 4e-34
Identities = 91/98 (92%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
|| |||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>37458_dwi-mir-284:mirbase
Length = 99
Score = 133 bits (67), Expect = 3e-32
Identities = 92/99 (92%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaaggg-aaggcttgtgcactg 59
|||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||| ||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgttaggggaaaggcttgagcattg 60
Query: 60 cttacaaagtcagcaacttgattccagcaattgcggccc 98
| ||| |||||||||||||||||||||||||||||||||
Sbjct: 61 catactaagtcagcaacttgattccagcaattgcggccc 99
>36127_dan-mir-284:mirbase
Length = 98
Score = 131 bits (66), Expect = 1e-31
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| | || |||||||| | |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
|| |||||||||||||||||||||||||||||||||
Sbjct: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
>36205_der-mir-284:mirbase
Length = 98
Score = 131 bits (66), Expect = 1e-31
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| | || |||||||| | |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagtactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
|| |||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>37534_dya-mir-284:mirbase
Length = 98
Score = 131 bits (66), Expect = 1e-31
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| | || |||||||| | |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagtactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
|| |||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>37165_dse-mir-284:mirbase
Length = 98
Score = 115 bits (58), Expect = 6e-27
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| | || |||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
| |||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>37241_dsi-mir-284:mirbase
Length = 98
Score = 115 bits (58), Expect = 6e-27
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| | || |||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
| |||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>36432_dme-mir-284:mirbase
Length = 100
Score = 107 bits (54), Expect = 1e-24
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| | || |||||||| | |||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaataatgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
| |||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>36433_dme-mir-284:mirbase
Length = 100
Score = 107 bits (54), Expect = 1e-24
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| | || |||||||| | |||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaataatgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
| |||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
