miRNEST 2.0, an integrative microRNA resource :: BLAST
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 109 bits (55), Expect = 1e-24
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 165 aatccattgcaagatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagc 224
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 aatcaattgcaggatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagc 103
Query: 225 ttg 227
|||
Sbjct: 104 ttg 106
Score = 85.7 bits (43), Expect = 1e-17
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 9 caagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaa 43
Score = 40.1 bits (20), Expect = 7e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 9 caagcatgaggcaggaactgcattacttgcaagaaagtcacaag 52
||||| ||||||| ||||||| ||||||||||||| ||||||
Sbjct: 106 caagcttgaggcaacaactgcacaacttgcaagaaagccacaag 63
>42089_osa-MIR444d:mirbase
Length = 143
Score = 97.6 bits (49), Expect = 4e-21
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 182 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctc 131
Score = 77.8 bits (39), Expect = 3e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 14 ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaa 64
Score = 56.0 bits (28), Expect = 1e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 185 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 232
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 50.1 bits (25), Expect = 8e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaag 52
|||| ||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaag 81
>42088_osa-MIR444d:mirbase
Length = 143
Score = 97.6 bits (49), Expect = 4e-21
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 182 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctc 131
Score = 77.8 bits (39), Expect = 3e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 14 ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaa 64
Score = 56.0 bits (28), Expect = 1e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 185 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 232
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 50.1 bits (25), Expect = 8e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaag 52
|||| ||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaag 81
>42087_osa-MIR444d:mirbase
Length = 143
Score = 97.6 bits (49), Expect = 4e-21
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 182 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctc 131
Score = 77.8 bits (39), Expect = 3e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 14 ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaa 64
Score = 56.0 bits (28), Expect = 1e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 185 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 232
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 50.1 bits (25), Expect = 8e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaag 52
|||| ||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaag 81
>42649_tae-MIR444b:mirbase
Length = 162
Score = 93.7 bits (47), Expect = 6e-20
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 180 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctc 152
Score = 50.1 bits (25), Expect = 8e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaag 52
|||| ||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 150 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaag 102
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgc 38
|||||| ||||||||||| |||||||||||||||
Sbjct: 15 ggcaccgagcatgaggcaacaactgcattacttgc 49
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 91.7 bits (46), Expect = 2e-19
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 180 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 233
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114
Score = 50.1 bits (25), Expect = 8e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaag 52
|||| ||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 113 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaag 65
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 87.7 bits (44), Expect = 4e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 180 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 227
||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 58 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105
Score = 85.7 bits (43), Expect = 1e-17
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 9 caagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaa 43
>42091_osa-MIR444f:mirbase
Length = 154
Score = 87.7 bits (44), Expect = 4e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 191 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 152
Score = 50.1 bits (25), Expect = 8e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaag 41
||||||||||||||||||| ||||||||||||||||||
Sbjct: 3 ggtggcaccaagcatgaggttacaactgcattacttgcaag 43
Score = 42.1 bits (21), Expect = 2e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtca 48
|||| ||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 150 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaagtca 106
>42648_tae-MIR444:mirbase
Length = 426
Score = 85.7 bits (43), Expect = 1e-17
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 180 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctc 176
Score = 58.0 bits (29), Expect = 3e-09
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaag 52
|||| ||||| |||||||| |||||||| ||||||||||||| ||||||
Sbjct: 174 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaag 126
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgc 38
|||||| ||||||||||| |||||||||||||||
Sbjct: 22 ggcaccgagcatgaggcaacaactgcattacttgc 56
>42084_osa-MIR444b:mirbase
Length = 138
Score = 77.8 bits (39), Expect = 3e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 192 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctc 128
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 192 tttcttgcaagttgtgcagttgttgcctcaagcttg 227
||||||||||| |||||||||| |||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>42083_osa-MIR444b:mirbase
Length = 138
Score = 77.8 bits (39), Expect = 3e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 192 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctc 128
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 192 tttcttgcaagttgtgcagttgttgcctcaagcttg 227
||||||||||| |||||||||| |||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 73.8 bits (37), Expect = 5e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 192 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 232
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 40.1 bits (20), Expect = 7e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 192 tttcttgcaagttgtgcagttgttgcctcaagcttg 227
||||||||||| | |||||||| |||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
>42086_osa-MIR444c:mirbase
Length = 138
Score = 69.9 bits (35), Expect = 8e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 192 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctc 126
>42085_osa-MIR444c:mirbase
Length = 138
Score = 69.9 bits (35), Expect = 8e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 192 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctc 126
>42082_osa-MIR444a:mirbase
Length = 131
Score = 67.9 bits (34), Expect = 3e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 193 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
|||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctc 122
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaa 43
|||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 67.9 bits (34), Expect = 3e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 193 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 234
|||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctc 122
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaa 43
|||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 191 ctttcttgcaagttgtgcagttgttgcctcaagcttgctg 230
||||||||||||||||||||||| || |||||||||||||
Sbjct: 77 ctttcttgcaagttgtgcagttgctgtctcaagcttgctg 116
Score = 61.9 bits (31), Expect = 2e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
||||||||||||||||||||| ||||||||||||| |||| |||| ||||
Sbjct: 1 ggtggcaccaagcatgaggcaacaactgcattactttcaaggaagttacaa 51
Score = 42.1 bits (21), Expect = 2e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 9 caagcatgaggcaggaactgcattacttgcaagaaagtcac 49
||||| |||| ||| ||||||| |||||||||||||||||
Sbjct: 113 caagcttgagacagcaactgcacaacttgcaagaaagtcac 73
>42090_osa-MIR444e:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 198 gcaagttgtgcagttgttgcctcaagcttgctgcct 233
||||||| |||||||| |||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>41805_bdi-MIR444:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 200 aagttgtgcagttgttgcctcaagcttgctgc 231
||||| |||||||| |||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
