miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36804_dmo-mir-286:mirbase
Length = 103
Score = 119 bits (60), Expect = 4e-28
Identities = 93/103 (90%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttcaaacaatataccatta--tct 58
||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtctctttttcaacatatacaccaaacattct 60
Query: 59 atataaagtgactagaccgaacactcgtgctataattttaaaa 101
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atataaagtgactagaccgaacactcgtgctataattttaaaa 103
>36296_dgr-mir-286-1:mirbase
Length = 104
Score = 95.6 bits (48), Expect = 6e-21
Identities = 92/105 (87%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttca----aacaatataccattat 56
||||||||||||||||||||||||||||||||||||| | ||| |||| | ||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttgaacctaaactctatat-acaat 59
Query: 57 ctatataaagtgactagaccgaacactcgtgctataattttaaaa 101
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atatataaagtgactagaccgaacactcgtgctataattttaaaa 104
>36297_dgr-mir-286-2:mirbase
Length = 104
Score = 95.6 bits (48), Expect = 6e-21
Identities = 92/105 (87%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttca----aacaatataccattat 56
||||||||||||||||||||||||||||||||||||| | ||| |||| | ||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttgaacctaaactctatat-acaat 59
Query: 57 ctatataaagtgactagaccgaacactcgtgctataattttaaaa 101
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atatataaagtgactagaccgaacactcgtgctataattttaaaa 104
>36129_dan-mir-286:mirbase
Length = 103
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 64 aagtgactagaccgaacactcgtgctataattttaaaa 101
||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtgactagaccgaacactcgtgctataattttaaaa 103
Score = 71.9 bits (36), Expect = 8e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttca 40
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 ttaaaattgaatggcgattgtcggtatggtcgctttttca 40
>36207_der-mir-286:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 64 aagtgactagaccgaacactcgtgctataattttaaaa 101
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtgactagaccgaacactcgtgctataattttaaaa 98
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttcaaa 42
|||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaa 42
>36436_dme-mir-286:mirbase
Length = 100
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 64 aagtgactagaccgaacactcgtgctataattttaaaa 101
||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagtgactagaccgaacactcgtgctataattttaaaa 99
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttcaaa 42
|||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaa 42
>36437_dme-mir-286:mirbase
Length = 100
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 64 aagtgactagaccgaacactcgtgctataattttaaaa 101
||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagtgactagaccgaacactcgtgctataattttaaaa 99
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttcaaa 42
|||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaa 42
>37167_dse-mir-286:mirbase
Length = 99
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 64 aagtgactagaccgaacactcgtgctataattttaaaa 101
||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagtgactagaccgaacactcgtgctataattttaaaa 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttc 39
|||||||| |||||||| ||||||||||||| |||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttc 39
>37243_dsi-mir-286:mirbase
Length = 100
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 64 aagtgactagaccgaacactcgtgctataattttaaaa 101
||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aagtgactagaccgaacactcgtgctataattttaaaa 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttc 39
|||||||| |||||||| ||||||||||||| |||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttc 39
>37536_dya-mir-286:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 64 aagtgactagaccgaacactcgtgctataattttaaaa 101
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtgactagaccgaacactcgtgctataattttaaaa 98
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttcaaa 42
|||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaa 42
>37460_dwi-mir-286:mirbase
Length = 108
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 63 aaagtgactagaccgaacactcgtgctataattttaa 99
|||||||||||||||||||||||||||||||||||||
Sbjct: 72 aaagtgactagaccgaacactcgtgctataattttaa 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 3 aaaattaaatggcgattgtcggtatggtcgctttttc 39
|||||| |||||||||||||||||| ||| |||||||
Sbjct: 1 aaaattgaatggcgattgtcggtatagtctctttttc 37
>36880_dpe-mir-286:mirbase
Length = 96
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 64 aagtgactagaccgaacactcgtgctataatttta 98
|||||||||||||||||||||||||||||||||||
Sbjct: 59 aagtgactagaccgaacactcgtgctataatttta 93
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttt 38
||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgcttttt 38
>36961_dps-mir-286:mirbase
Length = 97
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 64 aagtgactagaccgaacactcgtgctataatttta 98
|||||||||||||||||||||||||||||||||||
Sbjct: 59 aagtgactagaccgaacactcgtgctataatttta 93
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttt 38
||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgcttttt 38
>35216_aae-mir-286b-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 agtgactagaccgaacactcgt 86
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35217_aae-mir-286b-2:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 agtgactagaccgaacactcgt 86
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35215_aae-mir-286a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 agtgactagaccgaacactcg 85
|||||||||||||||||||||
Sbjct: 61 agtgactagaccgaacactcg 81
>35308_aga-mir-286:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 agtgactagaccgaacactcg 85
|||||||||||||||||||||
Sbjct: 59 agtgactagaccgaacactcg 79
