miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37470_dwi-mir-314:mirbase
Length = 90
Score = 95.6 bits (48), Expect = 5e-21
Identities = 84/92 (91%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggctt-gaatgtacctggttgaggaacgaattcaacgtttggatttt 59
|||||||||||||||||| |||||||||| ||||||||| ||||||| ||| |||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaa-aattcaatgtt-ggatttt 58
Query: 60 gttgcctttggtattcgagccaataagttcgg 91
||| ||| ||||||||||||||||||||||||
Sbjct: 59 gttacctctggtattcgagccaataagttcgg 90
>36143_dan-mir-314:mirbase
Length = 88
Score = 91.7 bits (46), Expect = 8e-20
Identities = 83/92 (90%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggctt-gaatgtacctggttgaggaacgaattcaacgtttggatttt 59
|||||||||||||||||| |||||||||| ||||||||| || ||| |||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaa--aaatca--gtttggatttt 56
Query: 60 gttgcctttggtattcgagccaataagttcgg 91
||| ||| ||||||||||||||||||||||||
Sbjct: 57 gttacctctggtattcgagccaataagttcgg 88
>36225_der-mir-314:mirbase
Length = 90
Score = 79.8 bits (40), Expect = 3e-16
Identities = 82/92 (89%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggctt-gaatgtacctggttgaggaacgaattcaacgtttggatttt 59
|||||||||||||||||| |||||||||| ||||||||| |||| | | || |||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaa-gaatcccatgtc-ggatttt 58
Query: 60 gttgcctttggtattcgagccaataagttcgg 91
||| ||| ||||||||||||||||||||||||
Sbjct: 59 gttacctctggtattcgagccaataagttcgg 90
>36814_dmo-mir-314:mirbase
Length = 95
Score = 67.9 bits (34), Expect = 1e-12
Identities = 84/96 (87%), Gaps = 6/96 (6%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggctt-gaatgtacctggttgag-gaa---cgaattcaacgtttgga 55
|||||||||||||||||| |||||||||| || ||| ||| |||||||| ||| |||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctcgtcgagcgaaaagcgaattcattgtt-gga 59
Query: 56 ttttgttgcctttggtattcgagccaataagttcgg 91
||||||||| |||||||||||||||||||||||||
Sbjct: 60 ttttgttgctcttggtattcgagccaataagttcgg 95
>37181_dse-mir-314:mirbase
Length = 90
Score = 67.9 bits (34), Expect = 1e-12
Identities = 82/93 (88%), Gaps = 5/93 (5%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggctt-gaatgtacctggttgaggaacgaattcaacgttt-ggattt 58
|||||||||||||||||| |||||||||| ||||||||| || || ||| | ||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaa--aagtcc-cgtgtcggattt 57
Query: 59 tgttgcctttggtattcgagccaataagttcgg 91
|||| ||| ||||||||||||||||||||||||
Sbjct: 58 tgttacctctggtattcgagccaataagttcgg 90
>37257_dsi-mir-314:mirbase
Length = 90
Score = 67.9 bits (34), Expect = 1e-12
Identities = 82/93 (88%), Gaps = 5/93 (5%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggctt-gaatgtacctggttgaggaacgaattcaacgttt-ggattt 58
|||||||||||||||||| |||||||||| ||||||||| || || ||| | ||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaa--aagtcc-cgtgtcggattt 57
Query: 59 tgttgcctttggtattcgagccaataagttcgg 91
|||| ||| ||||||||||||||||||||||||
Sbjct: 58 tgttacctctggtattcgagccaataagttcgg 90
>36889_dpe-mir-314:mirbase
Length = 89
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 52 tggattttgttgcctttggtattcgagccaataagttcgg 91
||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 50 tggattttgttacctctggtattcgagccaataagttcgg 89
>36973_dps-mir-314:mirbase
Length = 89
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 52 tggattttgttgcctttggtattcgagccaataagttcgg 91
||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 50 tggattttgttacctctggtattcgagccaataagttcgg 89
>37550_dya-mir-314:mirbase
Length = 90
Score = 63.9 bits (32), Expect = 2e-11
Identities = 80/92 (86%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggctt-gaatgtacctggttgaggaacgaattcaacgtttggatttt 59
|||||||||||||||||| |||||||||| ||||||||| || | | || |||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaa-aaccccatgtc-ggatttt 58
Query: 60 gttgcctttggtattcgagccaataagttcgg 91
||| ||| ||||||||||||||||||||||||
Sbjct: 59 gttacctctggtattcgagccaataagttcgg 90
>36465_dme-mir-314:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 53 ggattttgttgcctttggtattcgagccaataagttcgg 91
|||||||||| ||| ||||||||||||||||||||||||
Sbjct: 52 ggattttgttacctctggtattcgagccaataagttcgg 90
>36466_dme-mir-314:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 53 ggattttgttgcctttggtattcgagccaataagttcgg 91
|||||||||| ||| ||||||||||||||||||||||||
Sbjct: 52 ggattttgttacctctggtattcgagccaataagttcgg 90
>36308_dgr-mir-314:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggctt-gaatgtacctgg 30
|||||||||||||||||| ||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctgg 31
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 ggtattcgagccaataagttcgg 91
|||||||||||||||||||||||
Sbjct: 54 ggtattcgagccaataagttcgg 76
