miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36161_der-mir-6-1:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 46 atatcacagtggctgttctttttgt 70
>36246_dgr-mir-6-1:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 45 atatcacagtggctgttctttttgt 69
>36249_dgr-mir-6-4:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 45 atatcacagtggctgttctttttgt 69
>36337_dme-mir-6-1:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 51 atatcacagtggctgttctttttgt 75
>36338_dme-mir-6-1:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 51 atatcacagtggctgttctttttgt 75
>36759_dmo-mir-6-1:mirbase
Length = 66
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 41 atatcacagtggctgttctttttgt 65
>36832_dpe-mir-6-1:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 44 atatcacagtggctgttctttttgt 68
>36908_dps-mir-6-1:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 49 atatcacagtggctgttctttttgt 73
>37121_dse-mir-6-1:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 46 atatcacagtggctgttctttttgt 70
>37199_dsi-mir-6-1:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 46 atatcacagtggctgttctttttgt 70
>37335_dvi-mir-6-1:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 45 atatcacagtggctgttctttttgt 69
>37336_dvi-mir-6-2:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 catatcacagtggctgttctttttg 67
|||||||||||||||||||||||||
Sbjct: 52 catatcacagtggctgttctttttg 76
>37489_dya-mir-6-1:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttgt 68
|||||||||||||||||||||||||
Sbjct: 46 atatcacagtggctgttctttttgt 70
>36083_dan-mir-6-1:mirbase
Length = 68
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 42 atatcacagtggctgttctttttg 65
>36084_dan-mir-6-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 57 atatcacagtggctgttctttttg 80
>36162_der-mir-6-2:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 46 atatcacagtggctgttctttttg 69
>36247_dgr-mir-6-2:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttctttttg 75
>36248_dgr-mir-6-3:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 39 atttcatatcacagtggctgttcttttt 66
|||| |||||||||||||||||||||||
Sbjct: 44 attttatatcacagtggctgttcttttt 71
>36250_dgr-mir-6-5:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttctttttg 75
>36251_dgr-mir-6-6:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 39 atttcatatcacagtggctgttcttttt 66
|||| |||||||||||||||||||||||
Sbjct: 44 attttatatcacagtggctgttcttttt 71
>36339_dme-mir-6-2:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 47 atatcacagtggctgttctttttg 70
>36340_dme-mir-6-2:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 47 atatcacagtggctgttctttttg 70
>36760_dmo-mir-6-2:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 54 atatcacagtggctgttctttttg 77
>36834_dpe-mir-6-3:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 57 atatcacagtggctgttctttttg 80
>36909_dps-mir-6-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 57 atatcacagtggctgttctttttg 80
>37122_dse-mir-6-2:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 47 atatcacagtggctgttctttttg 70
>37200_dsi-mir-6-2:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 47 atatcacagtggctgttctttttg 70
>37411_dwi-mir-6-2:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 68 atatcacagtggctgttctttttg 91
>37490_dya-mir-6-2:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttctttttg 67
||||||||||||||||||||||||
Sbjct: 47 atatcacagtggctgttctttttg 70
>36085_dan-mir-6-3:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 48 atatcacagtggctgttcttttt 70
>36163_der-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>36341_dme-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>36342_dme-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>36761_dmo-mir-6-3:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 51 atatcacagtggctgttcttttt 73
>36833_dpe-mir-6-2:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>36910_dps-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>37123_dse-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>37201_dsi-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>37337_dvi-mir-6-3:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 48 atatcacagtggctgttcttttt 70
>37412_dwi-mir-6-3:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 51 atatcacagtggctgttcttttt 73
>37491_dya-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 atatcacagtggctgttcttttt 66
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
