miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36836_dpe-mir-8:mirbase
Length = 87
Score = 119 bits (60), Expect = 4e-28
Identities = 84/92 (91%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
|||||||||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatc-----ctttagatacctctaa 55
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 56 tactgtcaggtaaagatgtcgtccgtgtcctt 87
>36912_dps-mir-8:mirbase
Length = 87
Score = 119 bits (60), Expect = 4e-28
Identities = 84/92 (91%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
|||||||||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatc-----ctttagatacctctaa 55
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 56 tactgtcaggtaaagatgtcgtccgtgtcctt 87
>36763_dmo-mir-8:mirbase
Length = 90
Score = 113 bits (57), Expect = 2e-26
Identities = 85/92 (92%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 2 aggacatctgttcacatcttaccgggcagcattagatt-ttgtactatagatatctctaa 60
|||||||||||||||||||||||||||||||||||||| ||| | || ||| ||||||
Sbjct: 1 aggacatctgttcacatcttaccgggcagcattagattcctgt--tttaaataactctaa 58
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 59 tactgtcaggtaaagatgtcgtccgtgtcctt 90
>36253_dgr-mir-8:mirbase
Length = 91
Score = 111 bits (56), Expect = 9e-26
Identities = 84/92 (91%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
||||||||||||||||||||||||||||||||||||||| | | | || ||| |||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagattct-tgatttaaataattctaa 59
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 60 tactgtcaggtaaagatgtcgtccgtgtcctt 91
>37339_dvi-mir-8:mirbase
Length = 91
Score = 111 bits (56), Expect = 9e-26
Identities = 84/92 (91%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
||||||||||||||||||||||||||||||||||||||| | | | || ||| |||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagattct-tgatttaaataattctaa 59
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 60 tactgtcaggtaaagatgtcgtccgtgtcctt 91
>36087_dan-mir-8:mirbase
Length = 88
Score = 107 bits (54), Expect = 1e-24
Identities = 84/92 (91%), Gaps = 4/92 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
|||||||||||||||||||||||||||||||||||||| | | || |||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatccttt-ct---gataactctaa 56
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 57 tactgtcaggtaaagatgtcgtccgtgtcctt 88
>36165_der-mir-8:mirbase
Length = 87
Score = 103 bits (52), Expect = 2e-23
Identities = 82/92 (89%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
||||||||||||||||||||||||||||||||||||| | || | ||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattaga-----tcctttttataactctaa 55
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 56 tactgtcaggtaaagatgtcgtccgtgtcctt 87
>36345_dme-mir-8:mirbase
Length = 87
Score = 103 bits (52), Expect = 2e-23
Identities = 82/92 (89%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
||||||||||||||||||||||||||||||||||||| | || | ||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattaga-----tcctttttataactctaa 55
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 56 tactgtcaggtaaagatgtcgtccgtgtcctt 87
>36346_dme-mir-8:mirbase
Length = 87
Score = 103 bits (52), Expect = 2e-23
Identities = 82/92 (89%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
||||||||||||||||||||||||||||||||||||| | || | ||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattaga-----tcctttttataactctaa 55
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 56 tactgtcaggtaaagatgtcgtccgtgtcctt 87
>37203_dsi-mir-8:mirbase
Length = 87
Score = 103 bits (52), Expect = 2e-23
Identities = 82/92 (89%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
||||||||||||||||||||||||||||||||||||| | || | ||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattaga-----tcctttttataactctaa 55
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 56 tactgtcaggtaaagatgtcgtccgtgtcctt 87
>37493_dya-mir-8:mirbase
Length = 87
Score = 103 bits (52), Expect = 2e-23
Identities = 82/92 (89%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
||||||||||||||||||||||||||||||||||||| | || | ||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattaga-----tcctttttataactctaa 55
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 56 tactgtcaggtaaagatgtcgtccgtgtcctt 87
>37125_dse-mir-8:mirbase
Length = 87
Score = 95.6 bits (48), Expect = 5e-21
Identities = 81/92 (88%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
||||||||||||||||||||||||||||||||||||| | || | | | ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattaga-----tcctttttaaaactctaa 55
Query: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 56 tactgtcaggtaaagatgtcgtccgtgtcctt 87
>35274_aga-mir-8:mirbase
Length = 86
Score = 79.8 bits (40), Expect = 3e-16
Identities = 72/79 (91%), Gaps = 4/79 (5%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattagattttgtactatag-atatctctaatactgt 66
||||||||||||||||||||||||||||||| | || ||| | |||| |||||||||||
Sbjct: 6 tctgttcacatcttaccgggcagcattagatat-gt--tatcggatatttctaatactgt 62
Query: 67 caggtaaagatgtcgtccg 85
|||||||||||||||||||
Sbjct: 63 caggtaaagatgtcgtccg 81
>36006_cqu-mir-8:mirbase
Length = 77
Score = 79.8 bits (40), Expect = 3e-16
Identities = 69/78 (88%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattagattttgtactatagatatctctaatactgtc 67
||||||||||||||||||||||||||||||| || | || ||| ||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagatatt---ttttaaatacttctaatactgtc 58
Query: 68 aggtaaagatgtcgtccg 85
||||||||||||||||||
Sbjct: 59 aggtaaagatgtcgtccg 76
>35171_aae-mir-8:mirbase
Length = 79
Score = 71.9 bits (36), Expect = 8e-14
Identities = 68/78 (87%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattagattttgtactatagatatctctaatactgtc 67
||||||||||||||||||||||||||||||| || | | ||| ||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagatatt---tttgaaatacttctaatactgtc 58
Query: 68 aggtaaagatgtcgtccg 85
||||||||||||||||||
Sbjct: 59 aggtaaagatgtcgtccg 76
>35344_ame-mir-8:mirbase
Length = 85
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagatt 39
|||||||||||||||||||||||||||||||||
Sbjct: 6 atctgttcacatcttaccgggcagcattagatt 38
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 56 tctaatactgtcaggtaaagatgtcgtc 83
||||||||||||||||||||||||||||
Sbjct: 50 tctaatactgtcaggtaaagatgtcgtc 77
>37602_nlo-mir-8:mirbase
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 66/77 (85%), Gaps = 4/77 (5%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagattttgtactatagatatctctaatactgt 66
||||||| |||||||||||||||||||||||| ||| | || | |||||||||||
Sbjct: 6 atctgtttacatcttaccgggcagcattagat----tacatttgaattttctaatactgt 61
Query: 67 caggtaaagatgtcgtc 83
|||||||||||||||||
Sbjct: 62 caggtaaagatgtcgtc 78
>37635_nvi-mir-8:mirbase
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 66/77 (85%), Gaps = 4/77 (5%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagattttgtactatagatatctctaatactgt 66
||||||| |||||||||||||||||||||||| ||| | || | |||||||||||
Sbjct: 6 atctgtttacatcttaccgggcagcattagat----tacatttgaattttctaatactgt 61
Query: 67 caggtaaagatgtcgtc 83
|||||||||||||||||
Sbjct: 62 caggtaaagatgtcgtc 78
>35518_bmo-mir-8:mirbase
Length = 102
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 56 tctaatactgtcaggtaaagatgtcgtccg 85
||||||||||||||||||||||||||||||
Sbjct: 58 tctaatactgtcaggtaaagatgtcgtccg 87
>34999_dpu-mir-8:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 tctaatactgtcaggtaaagatgtcgtccgtg 87
||||||||||||||||||||||||| ||||||
Sbjct: 59 tctaatactgtcaggtaaagatgtcctccgtg 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 catcttaccgggcagcattagatt 39
||||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagatt 33
>37695_tca-mir-8:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 9 ctgttcacatcttaccgggcagcattagatt 39
||||| |||||||||||||||||||||||||
Sbjct: 2 ctgttaacatcttaccgggcagcattagatt 32
>37696_tca-mir-8:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 9 ctgttcacatcttaccgggcagcattagatt 39
||||| |||||||||||||||||||||||||
Sbjct: 2 ctgttaacatcttaccgggcagcattagatt 32
>38851_lgi-mir-8:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 tctaatactgtcaggtaaagatgtc 80
|||||||||||||||||||||||||
Sbjct: 59 tctaatactgtcaggtaaagatgtc 83
>38728_cte-mir-8:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 tctaatactgtcaggtaaagatgtc 80
|||||||||||||||||||||||||
Sbjct: 58 tctaatactgtcaggtaaagatgtc 82
>34963_isc-mir-8:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 tctaatactgtcaggtaaagatgtc 80
|||||||||||||||||||||||||
Sbjct: 56 tctaatactgtcaggtaaagatgtc 80
>37561_lmi-mir-8:mirbase
Length = 61
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 catcttaccgggcagcattagatt 39
||||||||||||||||||||||||
Sbjct: 1 catcttaccgggcagcattagatt 24
>35047_api-mir-8:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 50 gatatctctaatactgtcaggtaaagatgtc 80
||||| |||||||||||||||||| ||||||
Sbjct: 33 gatatgtctaatactgtcaggtaatgatgtc 63
