miRNEST 2.0, an integrative microRNA resource :: BLAST
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 103 bits (52), Expect = 5e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 155 aatccattgcaagatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagc 214
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 aatcaattgcaggatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagc 103
Score = 81.8 bits (41), Expect = 2e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 agcatgaggcaggaactgcattacttgcaagaaagtcacaa 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agcatgaggcaggaactgcattacttgcaagaaagtcacaa 43
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 81.8 bits (41), Expect = 2e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 agcatgaggcaggaactgcattacttgcaagaaagtcacaa 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agcatgaggcaggaactgcattacttgcaagaaagtcacaa 43
Score = 81.8 bits (41), Expect = 2e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 170 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagc 214
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 58 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagc 102
>42089_osa-MIR444d:mirbase
Length = 143
Score = 77.8 bits (39), Expect = 3e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 172 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagc 214
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagc 121
Score = 58.0 bits (29), Expect = 3e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 agcatgaggcaggaactgcattacttgcaagaaagtcacaa 41
||||||||||| |||||||||||||||||||||| |||||
Sbjct: 24 agcatgaggcaacaactgcattacttgcaagaaaggcacaa 64
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 175 ttgtggctttcttgcaagttgtgcagttgttgcctca 211
||||| ||||||||||||| ||||||||||||||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctca 28
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tgaggcaggaactgcattacttgcaagaaagtcacaag 42
|||||||| ||||||| ||||||||||||| ||||||
Sbjct: 118 tgaggcagcaactgcacaacttgcaagaaagccacaag 81
>42088_osa-MIR444d:mirbase
Length = 143
Score = 77.8 bits (39), Expect = 3e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 172 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagc 214
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagc 121
Score = 58.0 bits (29), Expect = 3e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 agcatgaggcaggaactgcattacttgcaagaaagtcacaa 41
||||||||||| |||||||||||||||||||||| |||||
Sbjct: 24 agcatgaggcaacaactgcattacttgcaagaaaggcacaa 64
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 175 ttgtggctttcttgcaagttgtgcagttgttgcctca 211
||||| ||||||||||||| ||||||||||||||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctca 28
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tgaggcaggaactgcattacttgcaagaaagtcacaag 42
|||||||| ||||||| ||||||||||||| ||||||
Sbjct: 118 tgaggcagcaactgcacaacttgcaagaaagccacaag 81
>42087_osa-MIR444d:mirbase
Length = 143
Score = 77.8 bits (39), Expect = 3e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 172 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagc 214
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagc 121
Score = 58.0 bits (29), Expect = 3e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 agcatgaggcaggaactgcattacttgcaagaaagtcacaa 41
||||||||||| |||||||||||||||||||||| |||||
Sbjct: 24 agcatgaggcaacaactgcattacttgcaagaaaggcacaa 64
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 175 ttgtggctttcttgcaagttgtgcagttgttgcctca 211
||||| ||||||||||||| ||||||||||||||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctca 28
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tgaggcaggaactgcattacttgcaagaaagtcacaag 42
|||||||| ||||||| ||||||||||||| ||||||
Sbjct: 118 tgaggcagcaactgcacaacttgcaagaaagccacaag 81
>42649_tae-MIR444b:mirbase
Length = 162
Score = 73.8 bits (37), Expect = 5e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 170 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagc 214
|||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagc 142
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tgaggcaggaactgcattacttgcaagaaagtcacaag 42
|||||||| ||||||| ||||||||||||| ||||||
Sbjct: 139 tgaggcagcaactgcacgacttgcaagaaagccacaag 102
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 agcatgaggcaggaactgcattacttgc 28
||||||||||| |||||||||||||||
Sbjct: 22 agcatgaggcaacaactgcattacttgc 49
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 73.8 bits (37), Expect = 5e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 170 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagc 214
|||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagc 105
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 5 tgaggcaggaactgcattacttgcaagaaagtcacaag 42
|||||||| ||||||| ||||||||||||| ||||||
Sbjct: 102 tgaggcagcaactgcacgacttgcaagaaagccacaag 65
>42091_osa-MIR444f:mirbase
Length = 154
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 181 ctttcttgcaagttgtgcagttgttgcctcaagc 214
||||||||||||||||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagc 142
>42648_tae-MIR444:mirbase
Length = 426
Score = 65.9 bits (33), Expect = 1e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 170 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagc 214
|||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagc 166
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 5 tgaggcaggaactgcattacttgcaagaaagtcacaag 42
|||||||| |||||||| ||||||||||||| ||||||
Sbjct: 163 tgaggcagcaactgcatgacttgcaagaaagccacaag 126
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 agcatgaggcaggaactgcattacttgc 28
||||||||||| |||||||||||||||
Sbjct: 29 agcatgaggcaacaactgcattacttgc 56
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 182 tttcttgcaagttgtgcagttgttgcctcaagc 214
||||||||||||||||||||||||| |||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagc 100
>42084_osa-MIR444b:mirbase
Length = 138
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 182 tttcttgcaagttgtgcagttgttgcctcaagc 214
||||||||||||||||||||||||| |||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagc 118
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 182 tttcttgcaagttgtgcagttgttgcctcaagc 214
||||||||||| |||||||||| |||| |||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagc 21
>42083_osa-MIR444b:mirbase
Length = 138
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 182 tttcttgcaagttgtgcagttgttgcctcaagc 214
||||||||||||||||||||||||| |||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagc 118
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 182 tttcttgcaagttgtgcagttgttgcctcaagc 214
||||||||||| |||||||||| |||| |||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagc 21
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 181 ctttcttgcaagttgtgcagttgttgcctcaagc 214
||||||||||||||||||||||| || |||||||
Sbjct: 77 ctttcttgcaagttgtgcagttgctgtctcaagc 110
Score = 42.1 bits (21), Expect = 2e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 1 agcatgaggcaggaactgcattacttgcaagaaagtcacaa 41
||||||||||| ||||||||||||| |||| |||| ||||
Sbjct: 11 agcatgaggcaacaactgcattactttcaaggaagttacaa 51
>42086_osa-MIR444c:mirbase
Length = 138
Score = 50.1 bits (25), Expect = 7e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 182 tttcttgcaagttgtgcagttgttgcctcaagc 214
||||||||||| ||||||||||||| |||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagc 116
>42085_osa-MIR444c:mirbase
Length = 138
Score = 50.1 bits (25), Expect = 7e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 182 tttcttgcaagttgtgcagttgttgcctcaagc 214
||||||||||| ||||||||||||| |||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagc 116
>42082_osa-MIR444a:mirbase
Length = 131
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 183 ttcttgcaagttgtgcagttgttgcctcaagc 214
|||||||||||| |||||||| ||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagc 112
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 5 tgaggcaggaactgcattacttgcaagaa 33
|||||||| |||||||| |||||||||||
Sbjct: 109 tgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 183 ttcttgcaagttgtgcagttgttgcctcaagc 214
|||||||||||| |||||||| ||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagc 112
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 5 tgaggcaggaactgcattacttgcaagaa 33
|||||||| |||||||| |||||||||||
Sbjct: 109 tgaggcagcaactgcataacttgcaagaa 81
