miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36264_dgr-mir-31a:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 gaattggcaagatgtcggcatagctga 37
|||||||||||||||||||||||||||
Sbjct: 10 gaattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 57 agcgctatgctgcatctagtcagtt 81
>36774_dmo-mir-31a:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 gaattggcaagatgtcggcatagctga 37
|||||||||||||||||||||||||||
Sbjct: 10 gaattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 57 agcgctatgctgcatctagtcagtt 81
>36098_dan-mir-31a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 58 agcgctatgctgcatctagtcagtt 82
>36176_der-mir-31a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 58 agcgctatgctgcatctagtcagtt 82
>36367_dme-mir-31a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 58 agcgctatgctgcatctagtcagtt 82
>36368_dme-mir-31a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 58 agcgctatgctgcatctagtcagtt 82
>36847_dpe-mir-31a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 cgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||
Sbjct: 60 cgctatgctgcatctagtcagtt 82
>36923_dps-mir-31a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 cgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||
Sbjct: 60 cgctatgctgcatctagtcagtt 82
>37136_dse-mir-31a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 58 agcgctatgctgcatctagtcagtt 82
>37212_dsi-mir-31a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 58 agcgctatgctgcatctagtcagtt 82
>37350_dvi-mir-31a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agcgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||||
Sbjct: 58 agcgctatgctgcatctagtcagtt 82
>37504_dya-mir-31a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 aattggcaagatgtcggcatagctga 37
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 cgctatgctgcatctagtcagtt 77
|||||||||||||||||||||||
Sbjct: 60 cgctatgctgcatctagtcagtt 82
>35356_ame-mir-31a:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 ggcaagatgtcggcatagctgat 38
|||||||||||||||||||||||
Sbjct: 28 ggcaagatgtcggcatagctgat 50
>37575_ngi-mir-31a:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 ggcaagatgtcggcatagctgat 38
|||||||||||||||||||||||
Sbjct: 4 ggcaagatgtcggcatagctgat 26
>37607_nlo-mir-31a:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 ggcaagatgtcggcatagctgat 38
|||||||||||||||||||||||
Sbjct: 4 ggcaagatgtcggcatagctgat 26
>37643_nvi-mir-31a:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 ggcaagatgtcggcatagctgat 38
|||||||||||||||||||||||
Sbjct: 28 ggcaagatgtcggcatagctgat 50
>35003_dpu-mir-31:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ggcaagatgtcggcatagctga 37
||||||||||||||||||||||
Sbjct: 22 ggcaagatgtcggcatagctga 43
>37720_tca-mir-31:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ggcaagatgtcggcatagctga 37
||||||||||||||||||||||
Sbjct: 12 ggcaagatgtcggcatagctga 33
>37719_tca-mir-31:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ggcaagatgtcggcatagctga 37
||||||||||||||||||||||
Sbjct: 12 ggcaagatgtcggcatagctga 33
>35182_aae-mir-31:mirbase
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
|||||||||||| |||||||||||
Sbjct: 50 ttggcaagatgttggcatagctga 73
>36013_cqu-mir-31:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
|||||||||||| |||||||||||
Sbjct: 11 ttggcaagatgttggcatagctga 34
>36099_dan-mir-31b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 3 ttggcaagatgtcggaatagctga 26
>36177_der-mir-31b:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36
>36265_dgr-mir-31b:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36
>36369_dme-mir-31b:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36
>36370_dme-mir-31b:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36
>36775_dmo-mir-31b:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36
>36848_dpe-mir-31b:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 3 ttggcaagatgtcggaatagctga 26
>36924_dps-mir-31b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 4 ttggcaagatgtcggaatagctga 27
>37137_dse-mir-31b:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36
>37213_dsi-mir-31b:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36
>37351_dvi-mir-31b:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36
>37428_dwi-mir-31b:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 11 ttggcaagatgtcggaatagctga 34
>37505_dya-mir-31b:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ttggcaagatgtcggcatagctga 37
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36
