miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36177_der-mir-31b:mirbase
Length = 127
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcattagtttg 138
|||||||||||||||||||||||||||||| ||||
Sbjct: 93 cggctatgcctcatctagtcaattgcattactttg 127
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>36369_dme-mir-31b:mirbase
Length = 127
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcattagtttg 138
|||||||||||||||||||||||||||||| ||||
Sbjct: 93 cggctatgcctcatctagtcaattgcattactttg 127
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>36370_dme-mir-31b:mirbase
Length = 127
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcattagtttg 138
|||||||||||||||||||||||||||||| ||||
Sbjct: 93 cggctatgcctcatctagtcaattgcattactttg 127
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>37137_dse-mir-31b:mirbase
Length = 127
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcattagtttg 138
|||||||||||||||||||||||||||||| ||||
Sbjct: 93 cggctatgcctcatctagtcaattgcattactttg 127
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>37213_dsi-mir-31b:mirbase
Length = 127
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcattagtttg 138
|||||||||||||||||||||||||||||| ||||
Sbjct: 93 cggctatgcctcatctagtcaattgcattactttg 127
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>37505_dya-mir-31b:mirbase
Length = 127
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcattagtttg 138
|||||||||||||||||||||||||||||| ||||
Sbjct: 93 cggctatgcctcatctagtcaattgcattactttg 127
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>36265_dgr-mir-31b:mirbase
Length = 126
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcatt 132
|||||||||||||||||||||||||||||
Sbjct: 92 cggctatgcctcatctagtcaattgcatt 120
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>36775_dmo-mir-31b:mirbase
Length = 127
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcatt 132
|||||||||||||||||||||||||||||
Sbjct: 93 cggctatgcctcatctagtcaattgcatt 121
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>36924_dps-mir-31b:mirbase
Length = 89
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcatt 132
|||||||||||||||||||||||||||||
Sbjct: 54 cggctatgcctcatctagtcaattgcatt 82
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 2 atttggcaagatgtcggaatagctga 27
>37351_dvi-mir-31b:mirbase
Length = 126
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattgcatt 132
|||||||||||||||||||||||||||||
Sbjct: 92 cggctatgcctcatctagtcaattgcatt 120
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 11 atttggcaagatgtcggaatagctga 36
>36099_dan-mir-31b:mirbase
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 1 atttggcaagatgtcggaatagctga 26
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaat 126
|||||||||||||||||||||||
Sbjct: 73 cggctatgcctcatctagtcaat 95
>36848_dpe-mir-31b:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 atttggcaagatgtcggaatagctga 34
||||||||||||||||||||||||||
Sbjct: 1 atttggcaagatgtcggaatagctga 26
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 104 cggctatgcctcatctagtcaattg 128
|||||||||||||||||||||||||
Sbjct: 53 cggctatgcctcatctagtcaattg 77
>36847_dpe-mir-31a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctgaa 35
||||||||||||||| |||||||||
Sbjct: 13 ttggcaagatgtcggcatagctgaa 37
>36923_dps-mir-31a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctgaa 35
||||||||||||||| |||||||||
Sbjct: 13 ttggcaagatgtcggcatagctgaa 37
>35182_aae-mir-31:mirbase
Length = 149
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctgaaagt 38
|||||||||||| || ||||||||||||
Sbjct: 50 ttggcaagatgttggcatagctgaaagt 77
>36013_cqu-mir-31:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctgaaagt 38
|||||||||||| || ||||||||||||
Sbjct: 11 ttggcaagatgttggcatagctgaaagt 38
>36098_dan-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctga 34
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36176_der-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctga 34
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36264_dgr-mir-31a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctga 34
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36367_dme-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctga 34
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36368_dme-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctga 34
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36774_dmo-mir-31a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctga 34
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37136_dse-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctga 34
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37212_dsi-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctga 34
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37350_dvi-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctga 34
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37427_dwi-mir-31a:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctga 34
||||||||||||||| ||||||||
Sbjct: 14 ttggcaagatgtcggcatagctga 37
>37504_dya-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttggcaagatgtcggaatagctga 34
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
