miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36178_der-mir-33:mirbase
Length = 90
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 7 acacgaaggtgcattgtagtcgcattgtctgt 38
||||||||||||||||||||||||||||||||
Sbjct: 9 acacgaaggtgcattgtagtcgcattgtctgt 40
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 ttcaggcaatacaactgcagtgcaagct 96
|||||||||||||||| |||||||||||
Sbjct: 50 ttcaggcaatacaacttcagtgcaagct 77
>36371_dme-mir-33:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 7 acacgaaggtgcattgtagtcgcattgtctgt 38
||||||||||||||||||||||||||||||||
Sbjct: 18 acacgaaggtgcattgtagtcgcattgtctgt 49
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 ttcaggcaatacaactgcagtgcaagct 96
|||||||||||||||| |||||||||||
Sbjct: 59 ttcaggcaatacaacttcagtgcaagct 86
>36372_dme-mir-33:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 7 acacgaaggtgcattgtagtcgcattgtctgt 38
||||||||||||||||||||||||||||||||
Sbjct: 18 acacgaaggtgcattgtagtcgcattgtctgt 49
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 ttcaggcaatacaactgcagtgcaagct 96
|||||||||||||||| |||||||||||
Sbjct: 59 ttcaggcaatacaacttcagtgcaagct 86
>37138_dse-mir-33:mirbase
Length = 90
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 7 acacgaaggtgcattgtagtcgcattgtctgt 38
||||||||||||||||||||||||||||||||
Sbjct: 9 acacgaaggtgcattgtagtcgcattgtctgt 40
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 ttcaggcaatacaactgcagtgcaagct 96
|||||||||||||||| |||||||||||
Sbjct: 50 ttcaggcaatacaacttcagtgcaagct 77
>37214_dsi-mir-33:mirbase
Length = 90
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 7 acacgaaggtgcattgtagtcgcattgtctgt 38
||||||||||||||||||||||||||||||||
Sbjct: 9 acacgaaggtgcattgtagtcgcattgtctgt 40
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 ttcaggcaatacaactgcagtgcaagct 96
|||||||||||||||| |||||||||||
Sbjct: 50 ttcaggcaatacaacttcagtgcaagct 77
>36266_dgr-mir-33:mirbase
Length = 92
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 8 cacgaaggtgcattgtagtcgcattgtctgt 38
|||||||||||||||||||||||||||||||
Sbjct: 10 cacgaaggtgcattgtagtcgcattgtctgt 40
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 73 ggcaatacaactgcagtgcaagcttcgtg 101
|||||||||||||||||||||||| ||||
Sbjct: 56 ggcaatacaactgcagtgcaagctccgtg 84
>37506_dya-mir-33:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 8 cacgaaggtgcattgtagtcgcattgtctgt 38
|||||||||||||||||||||||||||||||
Sbjct: 10 cacgaaggtgcattgtagtcgcattgtctgt 40
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 ttcaggcaatacaactgcagtgcaagct 96
|||||||||||||||| |||||||||||
Sbjct: 50 ttcaggcaatacaacttcagtgcaagct 77
>36849_dpe-mir-33:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 7 acacgaaggtgcattgtagtcgcattgtctgt 38
||||| ||||||||||||||||||||||||||
Sbjct: 9 acacgcaggtgcattgtagtcgcattgtctgt 40
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 69 ttcaggcaatacaactgcagtgcaagct 96
||||||||||||||||||||||||||||
Sbjct: 51 ttcaggcaatacaactgcagtgcaagct 78
>36925_dps-mir-33:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 7 acacgaaggtgcattgtagtcgcattgtctgt 38
||||| ||||||||||||||||||||||||||
Sbjct: 10 acacgcaggtgcattgtagtcgcattgtctgt 41
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 ttcaggcaatacaactgcagtgcaagct 96
||||||||||||||||||| ||||||||
Sbjct: 52 ttcaggcaatacaactgcaatgcaagct 79
>36100_dan-mir-33:mirbase
Length = 90
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 8 cacgaaggtgcattgtagtcgcattgtctgt 38
|||| ||||||||||||||||||||||||||
Sbjct: 10 cacgcaggtgcattgtagtcgcattgtctgt 40
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 71 caggcaatacaactgcagtgcaagct 96
||||||||||||||||||||||||||
Sbjct: 52 caggcaatacaactgcagtgcaagct 77
>36776_dmo-mir-33:mirbase
Length = 93
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 aggtgcattgtagtcgcattgtctgt 38
||||||||||||||||||||||||||
Sbjct: 15 aggtgcattgtagtcgcattgtctgt 40
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 73 ggcaatacaactgcagtgcaagcttcgtg 101
|||||||||||||||||||||||| ||||
Sbjct: 57 ggcaatacaactgcagtgcaagctccgtg 85
>37352_dvi-mir-33:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 aggtgcattgtagtcgcattgtctgt 38
||||||||||||||||||||||||||
Sbjct: 15 aggtgcattgtagtcgcattgtctgt 40
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 73 ggcaatacaactgcagtgcaagcttcgtg 101
|||||||||||||||||||||||| ||||
Sbjct: 56 ggcaatacaactgcagtgcaagctccgtg 84
