miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36271_dgr-mir-92b:mirbase
Length = 91
Score = 115 bits (58), Expect = 6e-27
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| |||||||||||||||||||||| ||| | || ||||||||||
Sbjct: 2 acgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaattg 61
Query: 62 cactagtcccggcctgcagtaagtgtcgca 91
|||||||||||||||||||| |||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtcgca 91
>36781_dmo-mir-92b:mirbase
Length = 91
Score = 107 bits (54), Expect = 1e-24
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| |||||||||||||||||||||| ||| || ||||||||||
Sbjct: 2 acgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatacaaattg 61
Query: 62 cactagtcccggcctgcagtaagtgtcgca 91
|||||||||||||||||||| |||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtcgca 91
>36183_der-mir-92b:mirbase
Length = 91
Score = 99.6 bits (50), Expect = 3e-22
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| ||||||| ||||||||||||||| ||| | ||||||||||
Sbjct: 2 acgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaattg 61
Query: 62 cactagtcccggcctgcagtaagtgtcgca 91
|||||||||||||||||||| |||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtcgca 91
>37143_dse-mir-92b:mirbase
Length = 91
Score = 99.6 bits (50), Expect = 3e-22
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| ||||||| ||||||||||||||| ||| | ||||||||||
Sbjct: 2 acgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaattg 61
Query: 62 cactagtcccggcctgcagtaagtgtcgca 91
|||||||||||||||||||| |||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtcgca 91
>37218_dsi-mir-92b:mirbase
Length = 91
Score = 99.6 bits (50), Expect = 3e-22
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| ||||||| ||||||||||||||| ||| | ||||||||||
Sbjct: 2 acgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaattg 61
Query: 62 cactagtcccggcctgcagtaagtgtcgca 91
|||||||||||||||||||| |||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtcgca 91
>37357_dvi-mir-92b:mirbase
Length = 91
Score = 99.6 bits (50), Expect = 3e-22
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| |||||||||||||||||||||| ||| || || |||||||
Sbjct: 2 acgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatccaaattg 61
Query: 62 cactagtcccggcctgcagtaagtgtcgca 91
|||||||||||||||||||| |||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtcgca 91
>37511_dya-mir-92b:mirbase
Length = 91
Score = 99.6 bits (50), Expect = 3e-22
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| ||||||| ||||||||||||||| ||| | ||||||||||
Sbjct: 2 acgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaattg 61
Query: 62 cactagtcccggcctgcagtaagtgtcgca 91
|||||||||||||||||||| |||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtcgca 91
>36105_dan-mir-92b:mirbase
Length = 88
Score = 93.7 bits (47), Expect = 2e-20
Identities = 78/87 (89%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| ||||||| |||||||||||||| || || || ||||||||||
Sbjct: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttacttttggaa-atacaaattg 59
Query: 62 cactagtcccggcctgcagtaagtgtc 88
|||||||||||||||||||| ||||||
Sbjct: 60 cactagtcccggcctgcagtgagtgtc 86
>36381_dme-mir-92b:mirbase
Length = 100
Score = 91.7 bits (46), Expect = 8e-20
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| ||||||| ||||||||||||||| ||| | ||||||||||
Sbjct: 5 acgtcacctgatgtaggccgtgcccagtgcttatttgttgcattttcgaaatacaaattg 64
Query: 62 cactagtcccggcctgcagtaagtgtcgca 91
|||||||||||||||||| | |||||||||
Sbjct: 65 cactagtcccggcctgcaatgagtgtcgca 94
>36382_dme-mir-92b:mirbase
Length = 100
Score = 91.7 bits (46), Expect = 8e-20
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| ||||||| ||||||||||||||| ||| | ||||||||||
Sbjct: 5 acgtcacctgatgtaggccgtgcccagtgcttatttgttgcattttcgaaatacaaattg 64
Query: 62 cactagtcccggcctgcagtaagtgtcgca 91
|||||||||||||||||| | |||||||||
Sbjct: 65 cactagtcccggcctgcaatgagtgtcgca 94
>36854_dpe-mir-92b:mirbase
Length = 91
Score = 91.7 bits (46), Expect = 8e-20
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| ||||||| |||||||||||| | | ||| || ||||||||||
Sbjct: 2 acgtcacctgatgtaggccgtgcccagtgcttatttgtcgttgtttgaaaatacaaattg 61
Query: 62 cactagtcccggcctgcagtaagtgtcgca 91
||||||||||||||||||| |||||||||
Sbjct: 62 cactagtcccggcctgcagagagtgtcgca 91
>36930_dps-mir-92b:mirbase
Length = 100
Score = 91.7 bits (46), Expect = 8e-20
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
||||||| |||||||| ||||||| |||||||||||| | | ||| || ||||||||||
Sbjct: 5 acgtcacctgatgtaggccgtgcccagtgcttatttgtcgttgtttgaaaatacaaattg 64
Query: 62 cactagtcccggcctgcagtaagtgtcgca 91
||||||||||||||||||| |||||||||
Sbjct: 65 cactagtcccggcctgcagagagtgtcgca 94
>35189_aae-mir-92b:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 caaattgcactagtcccggcctgcag 80
||||||||||| ||||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgcag 75
>35287_aga-mir-92b:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 caaattgcactagtcccggcctgcag 80
||||||||||| ||||||||||||||
Sbjct: 52 caaattgcacttgtcccggcctgcag 77
>37733_tca-mir-92b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 55 caaattgcactagtcccggcctgca 79
||||||||||| |||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgca 74
>37734_tca-mir-92b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 55 caaattgcactagtcccggcctgca 79
||||||||||| |||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgca 74
>38863_lgi-mir-92:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 caaattgcactagtcccggcctgc 78
||||||||||| ||||||||||||
Sbjct: 58 caaattgcacttgtcccggcctgc 81
