miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36114_dan-mir-263b:mirbase
Length = 89
Score = 85.7 bits (43), Expect = 4e-18
Identities = 63/68 (92%), Gaps = 5/68 (7%)
Strand = Plus / Plus
Query: 1 atcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggt 60
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 13 atcttggcactgggagaattcacagttgatt-ttat----tattctgtggttctgcgggt 67
Query: 61 gccaaaat 68
||||||||
Sbjct: 68 gccaaaat 75
>36192_der-mir-263b:mirbase
Length = 89
Score = 83.8 bits (42), Expect = 1e-17
Identities = 62/67 (92%), Gaps = 5/67 (7%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
|||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgatt-ttat----tattctgtggttctgcgggtg 69
Query: 62 ccaaaat 68
|||||||
Sbjct: 70 ccaaaat 76
>36945_dps-mir-263b:mirbase
Length = 91
Score = 75.8 bits (38), Expect = 3e-15
Identities = 61/68 (89%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
||||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttggtttccat---atattctgtggttctgcgggtg 71
Query: 62 ccaaaatc 69
||||||||
Sbjct: 72 ccaaaatc 79
>37520_dya-mir-263b-1:mirbase
Length = 88
Score = 75.8 bits (38), Expect = 3e-15
Identities = 61/67 (91%), Gaps = 5/67 (7%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
|||||||||||||||||||||||||||| | |||| |||||||||||||||||||||
Sbjct: 14 tcttggcactgggagaattcacagttgact-ttat----tattctgtggttctgcgggtg 68
Query: 62 ccaaaat 68
|||||||
Sbjct: 69 ccaaaat 75
>37521_dya-mir-263b-2:mirbase
Length = 88
Score = 75.8 bits (38), Expect = 3e-15
Identities = 61/67 (91%), Gaps = 5/67 (7%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
|||||||||||||||||||||||||||| | |||| |||||||||||||||||||||
Sbjct: 14 tcttggcactgggagaattcacagttgact-ttat----tattctgtggttctgcgggtg 68
Query: 62 ccaaaat 68
|||||||
Sbjct: 69 ccaaaat 75
>36407_dme-mir-263b:mirbase
Length = 90
Score = 73.8 bits (37), Expect = 1e-14
Identities = 60/66 (90%), Gaps = 5/66 (7%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
|||||||||||||||||||||||||||| | |||| |||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgact-ttat----tattctgtggttctgcgggtg 69
Query: 62 ccaaaa 67
||||||
Sbjct: 70 ccaaaa 75
>36408_dme-mir-263b:mirbase
Length = 90
Score = 73.8 bits (37), Expect = 1e-14
Identities = 60/66 (90%), Gaps = 5/66 (7%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
|||||||||||||||||||||||||||| | |||| |||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgact-ttat----tattctgtggttctgcgggtg 69
Query: 62 ccaaaa 67
||||||
Sbjct: 70 ccaaaa 75
>36281_dgr-mir-263b:mirbase
Length = 75
Score = 71.9 bits (36), Expect = 5e-14
Identities = 59/66 (89%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 1 atcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggt 60
|||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 7 atcttggcactgggagaattcacagttg---gttatataatattctgtggttctgcgggt 63
Query: 61 gccaaa 66
||||||
Sbjct: 64 gccaaa 69
>36866_dpe-mir-263b:mirbase
Length = 92
Score = 71.9 bits (36), Expect = 5e-14
Identities = 56/62 (90%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
||||||||||||||||||||||||||| || | || ||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttggttttcat---atattctgtggttctgcgggtg 71
Query: 62 cc 63
||
Sbjct: 72 cc 73
>37366_dvi-mir-263b:mirbase
Length = 71
Score = 71.9 bits (36), Expect = 5e-14
Identities = 62/69 (89%), Gaps = 5/69 (7%)
Strand = Plus / Plus
Query: 1 atcttggcactgggagaattcacagttgatt-cttattcgatattctgtggttctgcggg 59
|||||||||||||||||||||||||| |||| | || ||||||||||||||||||||
Sbjct: 4 atcttggcactgggagaattcacagtcgattacata----atattctgtggttctgcggg 59
Query: 60 tgccaaaat 68
|||||||||
Sbjct: 60 tgccaaaat 68
>37152_dse-mir-263b:mirbase
Length = 90
Score = 65.9 bits (33), Expect = 3e-12
Identities = 59/66 (89%), Gaps = 5/66 (7%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
|||||||||||||||||||||||||||| | | || |||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgact-tgat----tattctgtggttctgcgggtg 69
Query: 62 ccaaaa 67
||||||
Sbjct: 70 ccaaaa 75
>37231_dsi-mir-263b:mirbase
Length = 90
Score = 65.9 bits (33), Expect = 3e-12
Identities = 59/66 (89%), Gaps = 5/66 (7%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 61
|||||||||||||||||||||||||||| | | || |||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgact-tgat----tattctgtggttctgcgggtg 69
Query: 62 ccaaaa 67
||||||
Sbjct: 70 ccaaaa 75
>35298_aga-mir-263b:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 cttggcactgggagaattcacagt 26
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>35203_aae-mir-263b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 cttggcactgggagaattcacag 25
|||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
>35546_bmo-mir-263b:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 cttggcactgggagaattcacag 25
|||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
>35378_ame-mir-263b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacag 25
|||||||||||| |||||||||||
Sbjct: 15 tcttggcactggaagaattcacag 38
>37585_ngi-mir-263b:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacag 25
|||||||||||| |||||||||||
Sbjct: 14 tcttggcactggaagaattcacag 37
>37616_nlo-mir-263b:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacag 25
|||||||||||| |||||||||||
Sbjct: 14 tcttggcactggaagaattcacag 37
>37658_nvi-mir-263b:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 tcttggcactgggagaattcacag 25
|||||||||||| |||||||||||
Sbjct: 9 tcttggcactggaagaattcacag 32
>35020_dpu-mir-263b:mirbase
Length = 73
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 3 cttggcactgggagaattcacag 25
||||||||||| |||||||||||
Sbjct: 7 cttggcactggaagaattcacag 29
>35074_api-mir-263b:mirbase
Length = 62
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 3 cttggcactgggagaattcacag 25
||||||||||| |||||||||||
Sbjct: 1 cttggcactggaagaattcacag 23
>37764_tca-mir-263b:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 3 cttggcactgggagaattcacag 25
||||||||||| |||||||||||
Sbjct: 10 cttggcactggaagaattcacag 32
>37763_tca-mir-263b:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 3 cttggcactgggagaattcacag 25
||||||||||| |||||||||||
Sbjct: 10 cttggcactggaagaattcacag 32
