miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36873_dpe-mir-279:mirbase
Length = 93
Score = 143 bits (72), Expect = 2e-35
Identities = 88/92 (95%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatat-ttagtatttgtg 59
||||||||||||||||||||||||||||||||||||||||| | | | ||||||||||||
Sbjct: 2 tactactgtttttagtgagtgagggtccagtgtttcacattgattttcttagtatttgtg 61
Query: 60 actagatccacactcattaataacggtagttc 91
||||||||||||||||||||||||||||||||
Sbjct: 62 actagatccacactcattaataacggtagttc 93
>36953_dps-mir-279:mirbase
Length = 95
Score = 143 bits (72), Expect = 2e-35
Identities = 88/92 (95%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatat-ttagtatttgtg 59
||||||||||||||||||||||||||||||||||||||||| | | | ||||||||||||
Sbjct: 4 tactactgtttttagtgagtgagggtccagtgtttcacattgattttcttagtatttgtg 63
Query: 60 actagatccacactcattaataacggtagttc 91
||||||||||||||||||||||||||||||||
Sbjct: 64 actagatccacactcattaataacggtagttc 95
>36199_der-mir-279:mirbase
Length = 93
Score = 127 bits (64), Expect = 1e-30
Identities = 86/92 (93%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatat-ttagtatttgtg 59
||||||||||||||||| ||| ||||||||||||||||||| | | | ||||||||||||
Sbjct: 2 tactactgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 61
Query: 60 actagatccacactcattaataacggtagttc 91
||||||||||||||||||||||||||||||||
Sbjct: 62 actagatccacactcattaataacggtagttc 93
>36421_dme-mir-279:mirbase
Length = 100
Score = 127 bits (64), Expect = 1e-30
Identities = 86/92 (93%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatat-ttagtatttgtg 59
||||||||||||||||| ||| ||||||||||||||||||| | | | ||||||||||||
Sbjct: 9 tactactgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 68
Query: 60 actagatccacactcattaataacggtagttc 91
||||||||||||||||||||||||||||||||
Sbjct: 69 actagatccacactcattaataacggtagttc 100
>36422_dme-mir-279:mirbase
Length = 100
Score = 127 bits (64), Expect = 1e-30
Identities = 86/92 (93%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatat-ttagtatttgtg 59
||||||||||||||||| ||| ||||||||||||||||||| | | | ||||||||||||
Sbjct: 9 tactactgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 68
Query: 60 actagatccacactcattaataacggtagttc 91
||||||||||||||||||||||||||||||||
Sbjct: 69 actagatccacactcattaataacggtagttc 100
>37528_dya-mir-279:mirbase
Length = 93
Score = 127 bits (64), Expect = 1e-30
Identities = 86/92 (93%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatat-ttagtatttgtg 59
||||||||||||||||| |||||||||||||| |||||||| | | | ||||||||||||
Sbjct: 2 tactactgtttttagtgggtgagggtccagtgcttcacattgattttcttagtatttgtg 61
Query: 60 actagatccacactcattaataacggtagttc 91
||||||||||||||||||||||||||||||||
Sbjct: 62 actagatccacactcattaataacggtagttc 93
>37373_dvi-mir-279:mirbase
Length = 94
Score = 123 bits (62), Expect = 2e-29
Identities = 86/93 (92%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatattt--agtatttgt 58
||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||
Sbjct: 2 tactactgtttttagtgagtgagggtccagtgtttcacattcgttttttcaagtatttgt 61
Query: 59 gactagatccacactcattaataacggtagttc 91
||||||||||||||||||||| |||||||||||
Sbjct: 62 gactagatccacactcattaacaacggtagttc 94
>36121_dan-mir-279:mirbase
Length = 89
Score = 119 bits (60), Expect = 4e-28
Identities = 84/91 (92%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatatttagtatttgtga 60
||||||||||||||||| ||||||||||||||||||||||| | | | ||||||||||
Sbjct: 1 tactactgtttttagtgggtgagggtccagtgtttcacattgatttct--gtatttgtga 58
Query: 61 ctagatccacactcattaataacggtagttc 91
|||||||||||||||||||||||||||||||
Sbjct: 59 ctagatccacactcattaataacggtagttc 89
>36288_dgr-mir-279:mirbase
Length = 91
Score = 119 bits (60), Expect = 4e-28
Identities = 82/88 (93%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 4 tactgtttttagtgagtgagggtccagtgtttcacattaaatatttagtatttgtgacta 63
|||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 5 tactgtttttagtgggtgagggtccagtgtttcacattgtttattt-gtatttgtgacta 63
Query: 64 gatccacactcattaataacggtagttc 91
|||||||||||||||| |||||||||||
Sbjct: 64 gatccacactcattaaaaacggtagttc 91
>36796_dmo-mir-279:mirbase
Length = 93
Score = 119 bits (60), Expect = 4e-28
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaat-atttagtatttgtg 59
||||||||||||||||||||||||||||||||||||||||| | || ||||||||||
Sbjct: 2 tactactgtttttagtgagtgagggtccagtgtttcacattgtttgcttaagtatttgtg 61
Query: 60 actagatccacactcattaataacggtagttc 91
|||||||||||||||||||| |||||||||||
Sbjct: 62 actagatccacactcattaaaaacggtagttc 93
>37159_dse-mir-279:mirbase
Length = 93
Score = 119 bits (60), Expect = 4e-28
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatat-ttagtatttgtg 59
|||| |||||||||||| ||| ||||||||||||||||||| | | | ||||||||||||
Sbjct: 2 tactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 61
Query: 60 actagatccacactcattaataacggtagttc 91
||||||||||||||||||||||||||||||||
Sbjct: 62 actagatccacactcattaataacggtagttc 93
>37237_dsi-mir-279:mirbase
Length = 93
Score = 119 bits (60), Expect = 4e-28
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatat-ttagtatttgtg 59
|||| |||||||||||| ||| ||||||||||||||||||| | | | ||||||||||||
Sbjct: 2 tactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 61
Query: 60 actagatccacactcattaataacggtagttc 91
||||||||||||||||||||||||||||||||
Sbjct: 62 actagatccacactcattaataacggtagttc 93
>35304_aga-mir-279:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 55 ttgtgactagatccacactcattaat 80
||||||||||||||||||||||||||
Sbjct: 53 ttgtgactagatccacactcattaat 78
>35383_ame-mir-279:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ttgtgactagatccacactcattaa 79
|||||||||||||||||||||||||
Sbjct: 64 ttgtgactagatccacactcattaa 88
>35209_aae-mir-279:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tgtgactagatccacactcattaa 79
||||||||||||||||||||||||
Sbjct: 59 tgtgactagatccacactcattaa 82
>36037_cqu-mir-279:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tgtgactagatccacactcattaa 79
||||||||||||||||||||||||
Sbjct: 47 tgtgactagatccacactcattaa 70
>37662_nvi-mir-279:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tgtgactagatccacactcattaa 79
||||||||||||||||||||||||
Sbjct: 65 tgtgactagatccacactcattaa 88
>37771_tca-mir-279a:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 gtgactagatccacactcattaa 79
|||||||||||||||||||||||
Sbjct: 42 gtgactagatccacactcattaa 64
>37772_tca-mir-279a:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 gtgactagatccacactcattaa 79
|||||||||||||||||||||||
Sbjct: 42 gtgactagatccacactcattaa 64
