miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36799_dmo-mir-281-2:mirbase
Length = 93
Score = 127 bits (64), Expect = 2e-30
Identities = 89/97 (91%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgta 60
||||||||||||||||||||||||||||||||||||| |||| |||||| ||| ||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagttatatacat----atttta 56
Query: 61 atactgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 57 atactgtcatggaattgctctctttgtataatattcg 93
>36291_dgr-mir-281-2:mirbase
Length = 93
Score = 125 bits (63), Expect = 6e-30
Identities = 90/97 (92%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgta 60
||||||||||||||||||||||||||||||||||||| |||| |||| ||| |||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagttatatac---cga-ttgta 56
Query: 61 atactgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 57 atactgtcatggaattgctctctttgtataatattcg 93
>37531_dya-mir-281-2:mirbase
Length = 92
Score = 119 bits (60), Expect = 4e-28
Identities = 89/97 (91%), Gaps = 5/97 (5%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgta 60
||||||| ||||||||||||||||||||||||||||| |||| ||||| |||||||
Sbjct: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagtt-aatacc----aattgta 55
Query: 61 atactgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 56 atactgtcatggaattgctctctttgtataatattcg 92
>36124_dan-mir-281-2:mirbase
Length = 94
Score = 115 bits (58), Expect = 6e-27
Identities = 89/97 (91%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgta 60
||||||| ||||||||||||||||||||||||||||| |||| || ||| || ||||||
Sbjct: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaa-aca--cggattgta 57
Query: 61 atactgtcatggaattgctctctttgtataatattcg 97
||||||||||||||||||||||||||||||| |||||
Sbjct: 58 atactgtcatggaattgctctctttgtataacattcg 94
>37376_dvi-mir-281-2:mirbase
Length = 91
Score = 113 bits (57), Expect = 2e-26
Identities = 88/97 (90%), Gaps = 6/97 (6%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgta 60
||||||||||||||||||||||||||||||||||||| || | ||||| ||||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagct--atacag----attgta 54
Query: 61 atactgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 55 atactgtcatggaattgctctctttgtataatattcg 91
>36202_der-mir-281-2:mirbase
Length = 92
Score = 101 bits (51), Expect = 9e-23
Identities = 82/89 (92%), Gaps = 5/89 (5%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgtaatactgtc 68
||||||||||||||||||||||||||||| |||| ||||| ||| |||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtcaagtt-aatac---cga-ttgtaatactgtc 63
Query: 69 atggaattgctctctttgtataatattcg 97
||||||||||||||||||||||| |||||
Sbjct: 64 atggaattgctctctttgtataacattcg 92
>36876_dpe-mir-281-2:mirbase
Length = 91
Score = 97.6 bits (49), Expect = 1e-21
Identities = 86/97 (88%), Gaps = 6/97 (6%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgta 60
||||||| ||||| ||||||||||||||||||||||| |||| | || || |||||
Sbjct: 1 cgaatagtgaaataaagagagctatccgtcgacagtcaagttaa-----tcaga-ttgta 54
Query: 61 atactgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 55 atactgtcatggaattgctctctttgtataatattcg 91
>36956_dps-mir-281-2:mirbase
Length = 91
Score = 97.6 bits (49), Expect = 1e-21
Identities = 86/97 (88%), Gaps = 6/97 (6%)
Strand = Plus / Plus
Query: 1 cgaatagcgaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgta 60
||||||| ||||| ||||||||||||||||||||||| |||| | || || |||||
Sbjct: 1 cgaatagtgaaataaagagagctatccgtcgacagtcaagttaa-----tcaga-ttgta 54
Query: 61 atactgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 55 atactgtcatggaattgctctctttgtataatattcg 91
>36426_dme-mir-281-2:mirbase
Length = 92
Score = 93.7 bits (47), Expect = 2e-20
Identities = 81/89 (91%), Gaps = 5/89 (5%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgtaatactgtc 68
||||||||||||||||||||||||||||| |||| || || ||| |||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtcaagtt-aagac---cga-ttgtaatactgtc 63
Query: 69 atggaattgctctctttgtataatattcg 97
||||||||||||||||||||||| |||||
Sbjct: 64 atggaattgctctctttgtataacattcg 92
>36427_dme-mir-281-2:mirbase
Length = 92
Score = 93.7 bits (47), Expect = 2e-20
Identities = 81/89 (91%), Gaps = 5/89 (5%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgtaatactgtc 68
||||||||||||||||||||||||||||| |||| || || ||| |||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtcaagtt-aagac---cga-ttgtaatactgtc 63
Query: 69 atggaattgctctctttgtataatattcg 97
||||||||||||||||||||||| |||||
Sbjct: 64 atggaattgctctctttgtataacattcg 92
>37162_dse-mir-281-2:mirbase
Length = 92
Score = 93.7 bits (47), Expect = 2e-20
Identities = 81/89 (91%), Gaps = 5/89 (5%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgtaatactgtc 68
||||||||||||||||||||||||||||| |||| || || ||| |||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtcaagtt-aagac---cga-ttgtaatactgtc 63
Query: 69 atggaattgctctctttgtataatattcg 97
||||||||||||||||||||||| |||||
Sbjct: 64 atggaattgctctctttgtataacattcg 92
>36875_dpe-mir-281-1:mirbase
Length = 88
Score = 77.8 bits (39), Expect = 1e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 59 taatactgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||||||
Sbjct: 50 taatactgtcatggaattgctctctttgtataatattcg 88
>36955_dps-mir-281-1:mirbase
Length = 88
Score = 77.8 bits (39), Expect = 1e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 59 taatactgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||||||
Sbjct: 50 taatactgtcatggaattgctctctttgtataatattcg 88
>37375_dvi-mir-281-1:mirbase
Length = 88
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 57 tgtaatactgtcatggaattgctctctttgtataatattcg 97
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 48 tgtaatactgtcatggaattgctctctttgtatgatattcg 88
>36290_dgr-mir-281-1:mirbase
Length = 88
Score = 71.9 bits (36), Expect = 8e-14
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 54 aattgtaatactgtcatggaattgctctctttgtataatattcg 97
|||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 45 aattttaatactgtcatggaattgctctctttgtatgatattcg 88
>36123_dan-mir-281-1:mirbase
Length = 86
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||
Sbjct: 52 actgtcatggaattgctctctttgtataatattcg 86
>36201_der-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtccag 40
||||||||| ||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccag 40
>36424_dme-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtccag 40
||||||||| ||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccag 40
>36425_dme-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtccag 40
||||||||| ||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccag 40
>36798_dmo-mir-281-1:mirbase
Length = 88
Score = 69.9 bits (35), Expect = 3e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 55 attgtaatactgtcatggaattgctctctttgtataatattcg 97
||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 46 attgtaaaactgtcatggaattgctctctttgtatgatattcg 88
>37161_dse-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtccag 40
||||||||| ||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccag 40
>37238_dsi-mir-281:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtccag 40
||||||||| ||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccag 40
>37530_dya-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctctttgtataatattcg 97
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37454_dwi-mir-281-1:mirbase
Length = 90
Score = 63.9 bits (32), Expect = 2e-11
Identities = 71/83 (85%), Gaps = 7/83 (8%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtccagtttaatacatccgaattgtaatactgtcatggaa 74
||||||||| |||||||||||||||||| || ||| || ||| ||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccagttaaa------cgattt-taaaactgtcatggaa 67
Query: 75 ttgctctctttgtataatattcg 97
||||||||||||||| |||||||
Sbjct: 68 ttgctctctttgtatgatattcg 90
>37781_tca-mir-281:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||||||||||||||||||||||||||
Sbjct: 5 aaatgaagagagctatccgtcgacagt 31
>37782_tca-mir-281:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||||||||||||||||||||||||||
Sbjct: 5 aaatgaagagagctatccgtcgacagt 31
>35557_bmo-mir-281:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 aatgaagagagctatccgtcgacagt 36
||||||||||||||||||||||||||
Sbjct: 7 aatgaagagagctatccgtcgacagt 32
>25355_odi-mir-281:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 aatactgtcatggaattgctctctt 84
|||||||||||||||||||||||||
Sbjct: 61 aatactgtcatggaattgctctctt 85
>35210_aae-mir-281:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 16 aaataaagagagctatccgtcgacagt 42
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctcttt 85
|||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78
>35305_aga-mir-281:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 15 aaataaagagagctatccgtcgacagt 41
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctcttt 85
|||||||||||||||||||||||
Sbjct: 55 actgtcatggaattgctctcttt 77
>36038_cqu-mir-281:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 21 aaataaagagagctatccgtcgacagt 47
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctcttt 85
|||||||||||||||||||||||
Sbjct: 61 actgtcatggaattgctctcttt 83
>37566_lmi-mir-281:mirbase
Length = 58
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtccagt 41
|||||||||||||||||||||| ||||
Sbjct: 1 aagagagctatccgtcgacagtacagt 27
>38122_bma-mir-281:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctcttt 85
|||||||||||||||||||||||
Sbjct: 51 actgtcatggaattgctctcttt 73
>38884_lgi-mir-281:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 aatactgtcatggaattgctctcttt 85
|||||||||||||| |||||||||||
Sbjct: 56 aatactgtcatggagttgctctcttt 81
>35081_api-mir-281:mirbase
Length = 62
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagt 36
||||||||||||||||||||||
Sbjct: 1 aagagagctatccgtcgacagt 22
>35386_ame-mir-281:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctctttgta 88
||||||||||| ||||||||||||||
Sbjct: 59 actgtcatggagttgctctctttgta 84
>37589_ngi-mir-281:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctctttgt 87
||||||||||| |||||||||||||
Sbjct: 45 actgtcatggacttgctctctttgt 69
>37620_nlo-mir-281:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctctttgt 87
||||||||||| |||||||||||||
Sbjct: 45 actgtcatggacttgctctctttgt 69
>37663_nvi-mir-281:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 63 actgtcatggaattgctctctttgt 87
||||||||||| |||||||||||||
Sbjct: 59 actgtcatggacttgctctctttgt 83
