miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36128_dan-mir-285:mirbase
Length = 98
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 53 ttcaattctagcaccattcgaaatcagtgctt 84
||||||||||||||||||||||||||||||||
Sbjct: 56 ttcaattctagcaccattcgaaatcagtgctt 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 actgagatcgattggtgcatagata 25
|||||||||||||||||||||||||
Sbjct: 13 actgagatcgattggtgcatagata 37
>36295_dgr-mir-285:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 53 ttcaattctagcaccattcgaaatcagtgctt 84
||||||||||||||||||||||||||||||||
Sbjct: 58 ttcaattctagcaccattcgaaatcagtgctt 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 actgagatcgattggtgcatagata 25
|||||||||||||||||||||||||
Sbjct: 13 actgagatcgattggtgcatagata 37
>36803_dmo-mir-285:mirbase
Length = 100
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 53 ttcaattctagcaccattcgaaatcagtgctt 84
||||||||||||||||||||||||||||||||
Sbjct: 59 ttcaattctagcaccattcgaaatcagtgctt 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 actgagatcgattggtgcatagataa 26
||||||||||||||||||||||||||
Sbjct: 13 actgagatcgattggtgcatagataa 38
>37380_dvi-mir-285:mirbase
Length = 100
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 53 ttcaattctagcaccattcgaaatcagtgctt 84
||||||||||||||||||||||||||||||||
Sbjct: 58 ttcaattctagcaccattcgaaatcagtgctt 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 actgagatcgattggtgcatagata 25
|||||||||||||||||||||||||
Sbjct: 13 actgagatcgattggtgcatagata 37
>36206_der-mir-285:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 52 attcaattctagcaccattcgaaatcagtgctt 84
|||||| ||||||||||||||||||||||||||
Sbjct: 55 attcaactctagcaccattcgaaatcagtgctt 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 actgagatcgattggtgcatagata 25
|||||||||||||||||||||||||
Sbjct: 13 actgagatcgattggtgcatagata 37
>37166_dse-mir-285:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 52 attcaattctagcaccattcgaaatcagtgctt 84
|||||| ||||||||||||||||||||||||||
Sbjct: 55 attcaactctagcaccattcgaaatcagtgctt 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 actgagatcgattggtgcatagata 25
|||||||||||||||||||||||||
Sbjct: 13 actgagatcgattggtgcatagata 37
>37242_dsi-mir-285:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 52 attcaattctagcaccattcgaaatcagtgctt 84
|||||| ||||||||||||||||||||||||||
Sbjct: 55 attcaactctagcaccattcgaaatcagtgctt 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 actgagatcgattggtgcatagata 25
|||||||||||||||||||||||||
Sbjct: 13 actgagatcgattggtgcatagata 37
>37535_dya-mir-285:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 52 attcaattctagcaccattcgaaatcagtgctt 84
|||||| ||||||||||||||||||||||||||
Sbjct: 55 attcaactctagcaccattcgaaatcagtgctt 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 actgagatcgattggtgcatagata 25
|||||||||||||||||||||||||
Sbjct: 13 actgagatcgattggtgcatagata 37
>36960_dps-mir-285:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 53 ttcaattctagcaccattcgaaatcagtgctt 84
||||| ||||||||||||||||||||||||||
Sbjct: 57 ttcaactctagcaccattcgaaatcagtgctt 88
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 actgagatcgattggtgcatagata 25
|||||||||||||||||||||||||
Sbjct: 13 actgagatcgattggtgcatagata 37
>36434_dme-mir-285:mirbase
Length = 99
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtgctt 84
||||||||||||||||||||||||||
Sbjct: 62 tctagcaccattcgaaatcagtgctt 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 actgagatcgattggtgcatagata 25
|||||||||||||||||||||||||
Sbjct: 13 actgagatcgattggtgcatagata 37
>36435_dme-mir-285:mirbase
Length = 99
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtgctt 84
||||||||||||||||||||||||||
Sbjct: 62 tctagcaccattcgaaatcagtgctt 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 actgagatcgattggtgcatagata 25
|||||||||||||||||||||||||
Sbjct: 13 actgagatcgattggtgcatagata 37
>24655_bfl-mir-29b:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtgctt 84
|||||||||||| |||||||||||||
Sbjct: 60 tctagcaccatttgaaatcagtgctt 85
>35214_aae-mir-285:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagt 80
||||||||||||||||||||||
Sbjct: 55 tctagcaccattcgaaatcagt 76
>36040_cqu-mir-285:mirbase
Length = 67
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagt 80
||||||||||||||||||||||
Sbjct: 44 tctagcaccattcgaaatcagt 65
>25453_pma-mir-29c:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 attctagcaccattcgaaatcagtg 81
|||||||||||||| ||||||||||
Sbjct: 51 attctagcaccatttgaaatcagtg 75
>35560_bmo-mir-285:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtgct 83
|||||||||||||||| ||||||||
Sbjct: 53 tctagcaccattcgaattcagtgct 77
>38736_cte-mir-29b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccattcgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 61 tagcaccatttgaaatcagtgctt 84
>25728_xtr-mir-29b:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>25912_gga-mir-29b-1:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>25913_gga-mir-29b-2:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>26419_tgu-mir-29b-1:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 39 tctagcaccatttgaaatcagtg 61
>26420_tgu-mir-29b-2:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 39 tctagcaccatttgaaatcagtg 61
>26649_cfa-mir-29b-1:mirbase
Length = 65
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 41 tctagcaccatttgaaatcagtg 63
>26650_cfa-mir-29b-2:mirbase
Length = 66
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 42 tctagcaccatttgaaatcagtg 64
>26971_eca-mir-29b:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>26972_eca-mir-29b-2:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>27355_mdo-mir-29b:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 53 tctagcaccatttgaaatcagtg 75
>27494_age-mir-29b:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>27554_lla-mir-29b:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>27602_sla-mir-29b:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>27677_mml-mir-29b-1:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>27678_mml-mir-29b-2:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>28190_mne-mir-29b:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>28276_ggo-mir-29b-1:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>28277_ggo-mir-29b-2:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>28388_hsa-mir-29b-1:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>28389_hsa-mir-29b-2:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>30063_ppa-mir-29b-1:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>30064_ppa-mir-29b-2:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>30173_ptr-mir-29b-1:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>30174_ptr-mir-29b-2:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>30778_ppy-mir-29b-1:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>30779_ppy-mir-29b-2:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>31448_oan-mir-29b-1:mirbase
Length = 121
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 74 tctagcaccatttgaaatcagtg 96
>31449_oan-mir-29b-2:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>31803_mmu-mir-29b-1:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 45 tctagcaccatttgaaatcagtg 67
>31804_mmu-mir-29b-2:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>32684_rno-mir-29b-1:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>32685_rno-mir-29b-2:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>33086_rno-mir-3587:mirbase
Length = 63
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 60 tctagcaccatttgaaatcagtg 38
>33159_bta-mir-29b-1:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>33160_bta-mir-29b-2:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>33936_ssc-mir-29b:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 49 tctagcaccatttgaaatcagtg 71
>34244_dre-mir-29b-1:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 50 tctagcaccatttgaaatcagtg 72
>34245_dre-mir-29b-2:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 54 tctagcaccatttgaaatcagtg 76
>34246_dre-mir-29b-3:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 53 tctagcaccatttgaaatcagtg 75
>34571_fru-mir-29b-1:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 48 tctagcaccatttgaaatcagtg 70
>34572_fru-mir-29b-2:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 43 tctagcaccatttgaaatcagtg 65
>34718_tni-mir-29b-1:mirbase
Length = 79
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 48 tctagcaccatttgaaatcagtg 70
>34719_tni-mir-29b-2:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 47 tctagcaccatttgaaatcagtg 69
>34868_sko-mir-29b:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tctagcaccattcgaaatcagtg 81
|||||||||||| ||||||||||
Sbjct: 59 tctagcaccatttgaaatcagtg 81
