miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37465_dwi-mir-306-1:mirbase
Length = 64
Score = 119 bits (60), Expect = 2e-28
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaaagaatatatatagacttgagagacgctctgtaccta 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gctcaggtacttagtgactctcaaagaatatatctagacttgagagacgctctgtaccta 60
Query: 61 gact 64
||||
Sbjct: 61 gact 64
>36135_dan-mir-306:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaa 24
||||||||||||||||||||||||
Sbjct: 13 gctcaggtacttagtgactctcaa 36
>36213_der-mir-306:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaa 24
||||||||||||||||||||||||
Sbjct: 13 gctcaggtacttagtgactctcaa 36
>36303_dgr-mir-306:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaa 24
||||||||||||||||||||||||
Sbjct: 3 gctcaggtacttagtgactctcaa 26
>36447_dme-mir-306:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaa 24
||||||||||||||||||||||||
Sbjct: 13 gctcaggtacttagtgactctcaa 36
>36448_dme-mir-306:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaa 24
||||||||||||||||||||||||
Sbjct: 13 gctcaggtacttagtgactctcaa 36
>36809_dmo-mir-306:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaa 24
||||||||||||||||||||||||
Sbjct: 1 gctcaggtacttagtgactctcaa 24
>36885_dpe-mir-306:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaa 24
||||||||||||||||||||||||
Sbjct: 11 gctcaggtacttagtgactctcaa 34
>36967_dps-mir-306:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaa 24
||||||||||||||||||||||||
Sbjct: 11 gctcaggtacttagtgactctcaa 34
>37173_dse-mir-306:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaa 24
||||||||||||||||||||||||
Sbjct: 12 gctcaggtacttagtgactctcaa 35
>37386_dvi-mir-306:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaa 24
||||||||||||||||||||||||
Sbjct: 6 gctcaggtacttagtgactctcaa 29
>37542_dya-mir-306:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctcaa 24
||||||||||||||||||||||||
Sbjct: 13 gctcaggtacttagtgactctcaa 36
>36042_cqu-mir-306:mirbase
Length = 72
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gctcaggtacttagtgactctca 23
||||||||||| |||||||||||
Sbjct: 4 gctcaggtactgagtgactctca 26
