miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36812_dmo-mir-309:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 attataagacaaacttcacccagtgatgc 29
|||||| ||||||||||||||||||||||
Sbjct: 75 attatacgacaaacttcacccagtgatgc 47
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 56 gcaaaactgaacaaagtttatcatataat 84
|||||||||||||||||||| | ||||||
Sbjct: 29 gcaaaactgaacaaagtttaccttataat 1
>36888_dpe-mir-309:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 56 gcaaaactgaacaaagtttatcatataat 84
|||||||||||||||||||||| ||||||
Sbjct: 29 gcaaaactgaacaaagtttatcgtataat 1
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1 attataagacaaacttcacccagtg 25
|||||||||||||||||||||||||
Sbjct: 68 attataagacaaacttcacccagtg 44
>36971_dps-mir-309:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 56 gcaaaactgaacaaagtttatcatataat 84
|||||||||||||||||||||| ||||||
Sbjct: 29 gcaaaactgaacaaagtttatcgtataat 1
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1 attataagacaaacttcacccagtg 25
|||||||||||||||||||||||||
Sbjct: 68 attataagacaaacttcacccagtg 44
>37389_dvi-mir-309:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 56 gcaaaactgaacaaagtttatcatataat 84
|||||||||||||||||||| ||||||||
Sbjct: 29 gcaaaactgaacaaagtttaccatataat 1
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 attataagacaaacttcacccagtgatgc 29
|||||| ||||||||||||||||||||||
Sbjct: 74 attatacgacaaacttcacccagtgatgc 46
>36306_dgr-mir-309-1:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1 attataagacaaacttcacccagtgatg 28
|||||| |||||||||||||||||||||
Sbjct: 76 attatacgacaaacttcacccagtgatg 49
>36307_dgr-mir-309-2:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1 attataagacaaacttcacccagtgatg 28
|||||| |||||||||||||||||||||
Sbjct: 76 attatacgacaaacttcacccagtgatg 49
