miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37474_dwi-mir-318-1:mirbase
Length = 71
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcattccacgagcatcactgggctttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttatgggatacaccaagttcagttttgtcgcattccacgagcatcactgggctttgttt 60
Query: 61 atctcata 68
||||||||
Sbjct: 61 atctcata 68
>36894_dpe-mir-318:mirbase
Length = 68
Score = 91.7 bits (46), Expect = 6e-20
Identities = 64/69 (92%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcattccacgagcatcactgggctttgttt 60
|||||||||| ||||||||||||||||||| |||| | |||||||||||||||||||||
Sbjct: 1 tttatgggatgcaccaagttcagttttgtcacatttc--gagcatcactgggctttgttt 58
Query: 61 atctcataa 69
|||||||||
Sbjct: 59 atctcataa 67
>36977_dps-mir-318:mirbase
Length = 68
Score = 91.7 bits (46), Expect = 6e-20
Identities = 64/69 (92%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcattccacgagcatcactgggctttgttt 60
|||||||||| ||||||||||||||||||| |||| | |||||||||||||||||||||
Sbjct: 1 tttatgggatgcaccaagttcagttttgtcacatttc--gagcatcactgggctttgttt 58
Query: 61 atctcataa 69
|||||||||
Sbjct: 59 atctcataa 67
>36312_dgr-mir-318:mirbase
Length = 69
Score = 85.7 bits (43), Expect = 4e-18
Identities = 65/70 (92%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcat-tccacgagcatcactgggctttgtt 59
|||||||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 1 tttatgggatacaccaagttcagttttgtcagatgtcca--agcatcactgggctttgtt 58
Query: 60 tatctcataa 69
||||||||||
Sbjct: 59 tatctcataa 68
>37397_dvi-mir-318:mirbase
Length = 69
Score = 85.7 bits (43), Expect = 4e-18
Identities = 65/70 (92%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcat-tccacgagcatcactgggctttgtt 59
|||||||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 1 tttatgggatacaccaagttcagttttgtcagatgtcca--agcatcactgggctttgtt 58
Query: 60 tatctcataa 69
||||||||||
Sbjct: 59 tatctcataa 68
>37556_dya-mir-318:mirbase
Length = 68
Score = 79.8 bits (40), Expect = 2e-16
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcattccacgagcatcactgggctttgttt 60
|||||||||||||| ||||||||||||||||| | || ||||||||||||||||||||
Sbjct: 1 tttatgggatacacacagttcagttttgtcgcactaca--agcatcactgggctttgttt 58
Query: 61 atctcat 67
|||||||
Sbjct: 59 atctcat 65
>36818_dmo-mir-318:mirbase
Length = 69
Score = 77.8 bits (39), Expect = 9e-16
Identities = 64/70 (91%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcat-tccacgagcatcactgggctttgtt 59
|||||||||||||| ||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 1 tttatgggatacactaagttcagttttgtcagatgtcca--agcatcactgggctttgtt 58
Query: 60 tatctcataa 69
||||||||||
Sbjct: 59 tatctcataa 68
>36229_der-mir-318:mirbase
Length = 68
Score = 71.9 bits (36), Expect = 5e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcattccacgagcatcactgggctttgttt 60
|||||||||||||| |||||||||||||| || | || ||||||||||||||||||||
Sbjct: 1 tttatgggatacacacagttcagttttgtcacacttca--agcatcactgggctttgttt 58
Query: 61 atctcat 67
|||||||
Sbjct: 59 atctcat 65
>36473_dme-mir-318:mirbase
Length = 68
Score = 71.9 bits (36), Expect = 5e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcattccacgagcatcactgggctttgttt 60
|||||||||||||| |||||||||||||| || | || ||||||||||||||||||||
Sbjct: 1 tttatgggatacacacagttcagttttgtcacacttca--agcatcactgggctttgttt 58
Query: 61 atctcat 67
|||||||
Sbjct: 59 atctcat 65
>36474_dme-mir-318:mirbase
Length = 68
Score = 71.9 bits (36), Expect = 5e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcattccacgagcatcactgggctttgttt 60
|||||||||||||| |||||||||||||| || | || ||||||||||||||||||||
Sbjct: 1 tttatgggatacacacagttcagttttgtcacacttca--agcatcactgggctttgttt 58
Query: 61 atctcat 67
|||||||
Sbjct: 59 atctcat 65
>37185_dse-mir-318:mirbase
Length = 68
Score = 71.9 bits (36), Expect = 5e-14
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcattccacgagcatcactgggctttgttt 60
|||||||||||||| |||||||||||||| || | || ||||||||||||||||||||
Sbjct: 1 tttatgggatacacacagttcagttttgtcacacttca--agcatcactgggctttgttt 58
Query: 61 atctcat 67
|||||||
Sbjct: 59 atctcat 65
>37261_dsi-mir-318:mirbase
Length = 68
Score = 63.9 bits (32), Expect = 1e-11
Identities = 59/67 (88%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcgcattccacgagcatcactgggctttgttt 60
|||||||||||||| |||||||||||||| || | | ||||||||||||||||||||
Sbjct: 1 tttatgggatacacacagttcagttttgtcacacttta--agcatcactgggctttgttt 58
Query: 61 atctcat 67
|||||||
Sbjct: 59 atctcat 65
>36147_dan-mir-318:mirbase
Length = 69
Score = 61.9 bits (31), Expect = 5e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 39 cgagcatcactgggctttgtttatctcataa 69
|||||||||||||||||||||||||||||||
Sbjct: 38 cgagcatcactgggctttgtttatctcataa 68
