miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37602_nlo-mir-8:mirbase
Length = 86
Score = 65.9 bits (33), Expect = 3e-12
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagattgcgactgagatttctaatactgtcaggtaacgatgt 60
|||||||||||||||||||||||| | ||| |||||||||||||||||||| |||||
Sbjct: 15 catcttaccgggcagcattagattacatttgaattttctaatactgtcaggtaaagatgt 74
Query: 61 c 61
|
Sbjct: 75 c 75
>37635_nvi-mir-8:mirbase
Length = 86
Score = 65.9 bits (33), Expect = 3e-12
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagattgcgactgagatttctaatactgtcaggtaacgatgt 60
|||||||||||||||||||||||| | ||| |||||||||||||||||||| |||||
Sbjct: 15 catcttaccgggcagcattagattacatttgaattttctaatactgtcaggtaaagatgt 74
Query: 61 c 61
|
Sbjct: 75 c 75
>34963_isc-mir-8:mirbase
Length = 94
Score = 60.0 bits (30), Expect = 2e-10
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagattgcgactgagatttctaatactgtcaggtaacgatgt 60
||||||||| | ||||||||||||| | |||| |||||||||||||||||||| |||||
Sbjct: 22 catcttaccagacagcattagattgagcctga--tttctaatactgtcaggtaaagatgt 79
Query: 61 c 61
|
Sbjct: 80 c 80
>37695_tca-mir-8:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 7e-10
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagattgcgactgagatttctaatactgtcaggtaacgatgt 60
|||||||||||||||||||||||| | | | | ||||||||||||||||||| |||||
Sbjct: 9 catcttaccgggcagcattagattacattttatacttctaatactgtcaggtaaagatgt 68
Query: 61 c 61
|
Sbjct: 69 c 69
>37696_tca-mir-8:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 7e-10
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagattgcgactgagatttctaatactgtcaggtaacgatgt 60
|||||||||||||||||||||||| | | | | ||||||||||||||||||| |||||
Sbjct: 9 catcttaccgggcagcattagattacattttatacttctaatactgtcaggtaaagatgt 68
Query: 61 c 61
|
Sbjct: 69 c 69
>35274_aga-mir-8:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 1e-08
Identities = 56/63 (88%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagat-tgcga-ctgagatttctaatactgtcaggtaacgat 58
||||||||||||||||||||||| || | | || ||||||||||||||||||||| |||
Sbjct: 14 catcttaccgggcagcattagatatgttatcggatatttctaatactgtcaggtaaagat 73
Query: 59 gtc 61
|||
Sbjct: 74 gtc 76
>34999_dpu-mir-8:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagattg 25
|||||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagattg 34
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 33 gatttctaatactgtcaggtaacgatgtc 61
|||||||||||||||||||||| ||||||
Sbjct: 55 gatttctaatactgtcaggtaaagatgtc 83
>35344_ame-mir-8:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagattg 25
|||||||||||||||||||||||||
Sbjct: 15 catcttaccgggcagcattagattg 39
>36087_dan-mir-8:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 2e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagattgcgactgagatttctaatactgtcaggtaacgatgt 60
||||||||||||||||||||||| |||| | |||||||||||||||||| |||||
Sbjct: 16 catcttaccgggcagcattagatcctttctgataactctaatactgtcaggtaaagatgt 75
Query: 61 c 61
|
Sbjct: 76 c 76
>36253_dgr-mir-8:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagatt 24
||||||||||||||||||||||||
Sbjct: 16 catcttaccgggcagcattagatt 39
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 ttctaatactgtcaggtaacgatgtc 61
||||||||||||||||||| ||||||
Sbjct: 54 ttctaatactgtcaggtaaagatgtc 79
>36763_dmo-mir-8:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagatt 24
||||||||||||||||||||||||
Sbjct: 15 catcttaccgggcagcattagatt 38
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 37 tctaatactgtcaggtaacgatgtc 61
|||||||||||||||||| ||||||
Sbjct: 54 tctaatactgtcaggtaaagatgtc 78
>37339_dvi-mir-8:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagatt 24
||||||||||||||||||||||||
Sbjct: 16 catcttaccgggcagcattagatt 39
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 ttctaatactgtcaggtaacgatgtc 61
||||||||||||||||||| ||||||
Sbjct: 54 ttctaatactgtcaggtaaagatgtc 79
>37414_dwi-mir-8:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagatt 24
||||||||||||||||||||||||
Sbjct: 16 catcttaccgggcagcattagatt 39
>39065_sme-mir-8a:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 tctaatactgtcaggtaacgatg 59
|||||||||||||||||||||||
Sbjct: 43 tctaatactgtcaggtaacgatg 65
>38851_lgi-mir-8:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 35 tttctaatactgtcaggtaacgatgtc 61
|||||||||||||||||||| ||||||
Sbjct: 57 tttctaatactgtcaggtaaagatgtc 83
>35171_aae-mir-8:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagat 23
|||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagat 32
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 ttctaatactgtcaggtaacgatgtc 61
||||||||||||||||||| ||||||
Sbjct: 46 ttctaatactgtcaggtaaagatgtc 71
>35518_bmo-mir-8:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 35 tttctaatactgtcaggtaacgatgtc 61
|||||||||||||||||||| ||||||
Sbjct: 56 tttctaatactgtcaggtaaagatgtc 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattaga 22
||||||||||||||||||||||
Sbjct: 21 catcttaccgggcagcattaga 42
>36006_cqu-mir-8:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagat 23
|||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagat 32
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 ttctaatactgtcaggtaacgatgtc 61
||||||||||||||||||| ||||||
Sbjct: 46 ttctaatactgtcaggtaaagatgtc 71
>36165_der-mir-8:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagat 23
|||||||||||||||||||||||
Sbjct: 16 catcttaccgggcagcattagat 38
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 37 tctaatactgtcaggtaacgatgtc 61
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>36345_dme-mir-8:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagat 23
|||||||||||||||||||||||
Sbjct: 16 catcttaccgggcagcattagat 38
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 37 tctaatactgtcaggtaacgatgtc 61
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>36346_dme-mir-8:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagat 23
|||||||||||||||||||||||
Sbjct: 16 catcttaccgggcagcattagat 38
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 37 tctaatactgtcaggtaacgatgtc 61
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>36836_dpe-mir-8:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagat 23
|||||||||||||||||||||||
Sbjct: 16 catcttaccgggcagcattagat 38
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 37 tctaatactgtcaggtaacgatgtc 61
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>36912_dps-mir-8:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagat 23
|||||||||||||||||||||||
Sbjct: 16 catcttaccgggcagcattagat 38
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 37 tctaatactgtcaggtaacgatgtc 61
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>37125_dse-mir-8:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagat 23
|||||||||||||||||||||||
Sbjct: 16 catcttaccgggcagcattagat 38
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 37 tctaatactgtcaggtaacgatgtc 61
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>37203_dsi-mir-8:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagat 23
|||||||||||||||||||||||
Sbjct: 16 catcttaccgggcagcattagat 38
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 37 tctaatactgtcaggtaacgatgtc 61
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>37493_dya-mir-8:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 catcttaccgggcagcattagat 23
|||||||||||||||||||||||
Sbjct: 16 catcttaccgggcagcattagat 38
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 37 tctaatactgtcaggtaacgatgtc 61
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>38728_cte-mir-8:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 ttctaatactgtcaggtaacgatgtc 61
||||||||||||||||||| ||||||
Sbjct: 57 ttctaatactgtcaggtaaagatgtc 82
>35047_api-mir-8:mirbase
Length = 63
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 37 tctaatactgtcaggtaacgatgtc 61
|||||||||||||||||| ||||||
Sbjct: 39 tctaatactgtcaggtaatgatgtc 63
