miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37608_nlo-mir-34:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 ggcgtgttggcagtgtggttagctggttgtgtagattatagaaagcacgaccgctatcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcgtgttggcagtgtggttagctggttgtgtagattatagaaagcacgaccgctatcgg 60
Query: 61 cactgcaattatgacggtcg 80
||||||||||||||||||||
Sbjct: 61 cactgcaattatgacggtcg 80
>37645_nvi-mir-34:mirbase
Length = 99
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 ggcgtgttggcagtgtggttagctggttgtgtagattatagaaagcacgaccgctatcgg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 14 ggcgtgttggcagtgtggttagctggttgtgtagcttatagaaagcacgaccgctatcga 73
Query: 61 cactgcaattatgacggtcg 80
||||||||||||||||||||
Sbjct: 74 cactgcaattatgacggtcg 93
>35358_ame-mir-34:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 47 acgaccgctatcggcactgcaattatgacg 76
||||||||||||||||||||||||||||||
Sbjct: 61 acgaccgctatcggcactgcaattatgacg 90
>35184_aae-mir-34:mirbase
Length = 129
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 8 tggcagtgtggttagctggttgtgtaga 35
||||||||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgtgtaga 43
>35531_bmo-mir-34:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 6 gttggcagtgtggttagctggttgtgta 33
||||||||||||||||||||||||||||
Sbjct: 19 gttggcagtgtggttagctggttgtgta 46
>36101_dan-mir-34:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgtag 34
||||||||||||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgtag 40
>36179_der-mir-34:mirbase
Length = 96
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgtag 34
||||||||||||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgtag 40
>36373_dme-mir-34:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgtag 34
||||||||||||||||||||||||||||
Sbjct: 16 ttggcagtgtggttagctggttgtgtag 43
>36374_dme-mir-34:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgtag 34
||||||||||||||||||||||||||||
Sbjct: 16 ttggcagtgtggttagctggttgtgtag 43
>36850_dpe-mir-34:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgtag 34
||||||||||||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgtag 40
>36926_dps-mir-34:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgtag 34
||||||||||||||||||||||||||||
Sbjct: 16 ttggcagtgtggttagctggttgtgtag 43
>37139_dse-mir-34:mirbase
Length = 96
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgtag 34
||||||||||||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgtag 40
>37215_dsi-mir-34:mirbase
Length = 96
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgtag 34
||||||||||||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgtag 40
>37430_dwi-mir-34:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgtag 34
||||||||||||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgtag 40
>37507_dya-mir-34:mirbase
Length = 96
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgtag 34
||||||||||||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgtag 40
>35005_dpu-mir-34:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 gttggcagtgtggttagctggttgtg 31
||||||||||||||||||||||||||
Sbjct: 20 gttggcagtgtggttagctggttgtg 45
>36267_dgr-mir-34:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgt 32
||||||||||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgt 38
>36777_dmo-mir-34:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgt 32
||||||||||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgt 38
>37353_dvi-mir-34:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 ttggcagtgtggttagctggttgtgt 32
||||||||||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgt 38
>35283_aga-mir-34:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 tggcagtgtggttagctggttgtgt 32
|||||||||||||||||||||||||
Sbjct: 17 tggcagtgtggttagctggttgtgt 41
>37723_tca-mir-34:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 tggcagtgtggttagctggttgtgt 32
|||||||||||||||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgtgt 35
>37724_tca-mir-34:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 tggcagtgtggttagctggttgtgt 32
|||||||||||||||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgtgt 35
>38739_cte-mir-34:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 tggcagtgtggttagctggttgtg 31
||||||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgtg 45
>34870_sko-mir-34:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 tggcagtgtggttagctggttgt 30
|||||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgt 44
>38100_bma-mir-34:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 tggcagtgtggttagctggttgt 30
|||||||||||||||||||||||
Sbjct: 23 tggcagtgtggttagctggttgt 45
>35054_api-mir-34:mirbase
Length = 68
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 tggcagtgtggttagctggttgtgta 33
|||||||||| |||||||||||||||
Sbjct: 1 tggcagtgtgattagctggttgtgta 26
>38488_crm-mir-34:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 ggcagtgtggttagctggttg 29
|||||||||||||||||||||
Sbjct: 16 ggcagtgtggttagctggttg 36
>38127_cbr-mir-34:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 ggcagtgtggttagctggttg 29
|||||||||||||||||||||
Sbjct: 19 ggcagtgtggttagctggttg 39
>38268_cel-mir-34:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 ggcagtgtggttagctggttg 29
|||||||||||||||||||||
Sbjct: 17 ggcagtgtggttagctggttg 37
>38858_lgi-mir-34:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 8 tggcagtgtggttagctggt 27
||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggt 41
