miRNEST 2.0, an integrative microRNA resource :: BLAST
>42781_zma-MIR319b:mirbase
Length = 213
Score = 369 bits (186), Expect = e-103
Identities = 186/186 (100%)
Strand = Plus / Plus
Query: 1 gatggaagagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gatggaagagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccg 74
Query: 61 actcattcacccacatgccaagcaaacggccatggaaaccagctttgcagatgagtgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 actcattcacccacatgccaagcaaacggccatggaaaccagctttgcagatgagtgaat 134
Query: 121 gaagcgggaggtaaaagcttcgatctcgcaccgtctttgcttggactgaagggtgctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gaagcgggaggtaaaagcttcgatctcgcaccgtctttgcttggactgaagggtgctccc 194
Query: 181 tcctcc 186
||||||
Sbjct: 195 tcctcc 200
>42783_zma-MIR319d:mirbase
Length = 212
Score = 339 bits (171), Expect = 5e-94
Identities = 180/183 (98%)
Strand = Plus / Plus
Query: 1 gatggaagagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 14 gatggaagagagcgtccttcagtccactcaggggcggtgctagggtcggattagctgccg 73
Query: 61 actcattcacccacatgccaagcaaacggccatggaaaccagctttgcagatgagtgaat 120
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 74 actcattcacccacatgccaagcaaacggccatggaaacgagcttcgcagatgagtgaat 133
Query: 121 gaagcgggaggtaaaagcttcgatctcgcaccgtctttgcttggactgaagggtgctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gaagcgggaggtaaaagcttcgatctcgcaccgtctttgcttggactgaagggtgctccc 193
Query: 181 tcc 183
|||
Sbjct: 194 tcc 196
>42563_sbi-MIR319:mirbase
Length = 249
Score = 327 bits (165), Expect = 2e-90
Identities = 184/190 (96%), Gaps = 4/190 (2%)
Strand = Plus / Plus
Query: 1 gatggaagagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 gatggaagagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccg 86
Query: 61 actcattcacccacatgccaagcaaacggccatggaaa----ccagctttgcagatgagt 116
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 87 actcattcacccacatgccaagcaaacggccatggaaacgagctagctttgcagatgagt 146
Query: 117 gaatgaagcgggaggtaaaagcttcgatctcgcaccgtctttgcttggactgaagggtgc 176
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 147 gaatgaagcgggaggtaaaagcttcgatctcgcaccatctttgcttggactgaagggtgc 206
Query: 177 tccctcctcc 186
||||||||||
Sbjct: 207 tccctcctcc 216
>41995_osa-MIR319b:mirbase
Length = 197
Score = 206 bits (104), Expect = 4e-54
Identities = 171/190 (90%), Gaps = 5/190 (2%)
Strand = Plus / Plus
Query: 1 gatggaagagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 gatggaagagagcgtccttcagtccactcatgggcggtgctagggtcgaattagctgccg 64
Query: 61 actcattcacccacatgccaagca--aacggccatggaaacc--agctttgcagatgagt 116
|||||||||||||||||||||||| || || || | | ||||| ||||||||||
Sbjct: 65 actcattcacccacatgccaagcaagaaacgcttgagatagcgaagcttagcagatgagt 124
Query: 117 gaatgaagcgggaggtaaaagcttcgatctcgcaccgtctttgcttggactgaagggtgc 176
|||||||||||||||| || | | ||||||||| ||||||||||||||||||||||||||
Sbjct: 125 gaatgaagcgggaggt-aacgttccgatctcgcgccgtctttgcttggactgaagggtgc 183
Query: 177 tccctcctcc 186
||||||||||
Sbjct: 184 tccctcctcc 193
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 58.0 bits (29), Expect = 2e-09
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 5 gaagagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccgactc 64
||||||||| | |||||||||||||| ||| || |||| | |||||||||||||||||
Sbjct: 8 gaagagagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactc 67
Query: 65 attca 69
|||||
Sbjct: 68 attca 72
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggtgctccct 181
|||||||||||||||| |||||||
Sbjct: 148 tgcttggactgaagggagctccct 171
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 56.0 bits (28), Expect = 1e-08
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 6 aagagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccgactca 65
|||||||| | |||||||||||||| ||| ||| |||| | |||||||||||||||||
Sbjct: 9 aagagagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactca 68
Query: 66 ttca 69
||||
Sbjct: 69 ttca 72
>40367_rco-MIR319a:mirbase
Length = 211
Score = 56.0 bits (28), Expect = 1e-08
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 6 aagagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccgactca 65
|||||||| | |||||||||||||| ||| || | |||| | |||||||||||||||||
Sbjct: 3 aagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactca 62
Query: 66 ttca 69
||||
Sbjct: 63 ttca 66
>40703_mtr-MIR319:mirbase
Length = 207
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 154 tctttgcttggactgaagggtgctccct 181
|||||||||||||||||||| |||||||
Sbjct: 162 tctttgcttggactgaagggagctccct 189
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 gaagagagcgtccttcagtccactca 30
||||||||| ||||||||||||||||
Sbjct: 17 gaagagagcttccttcagtccactca 42
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 43 gggtcgaattagctgccgactcattca 69
|||| ||||||||||||||||||||||
Sbjct: 49 gggttgaattagctgccgactcattca 75
>40465_gma-MIR319b:mirbase
Length = 208
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattcacccacatgc 78
||||||||||||||||||||| ||| ||||
Sbjct: 63 aattagctgccgactcattcatccaaatgc 92
>42782_zma-MIR319c:mirbase
Length = 216
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 ttggactgaagggtgctccct 181
|||||||||||||||||||||
Sbjct: 178 ttggactgaagggtgctccct 198
>42780_zma-MIR319a:mirbase
Length = 209
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 ttggactgaagggtgctccct 181
|||||||||||||||||||||
Sbjct: 171 ttggactgaagggtgctccct 191
>42642_tae-MIR319:mirbase
Length = 211
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggtgctccctc 182
|||||||||||||||| ||||||||
Sbjct: 181 tgcttggactgaagggagctccctc 205
>42564_sbi-MIR319b:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 ttggactgaagggtgctccct 181
|||||||||||||||||||||
Sbjct: 158 ttggactgaagggtgctccct 178
>41994_osa-MIR319a:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 ttggactgaagggtgctccct 181
|||||||||||||||||||||
Sbjct: 162 ttggactgaagggtgctccct 182
>41771_bdi-MIR319b:mirbase
Length = 190
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 ttggactgaagggtgctccct 181
|||||||||||||||||||||
Sbjct: 159 ttggactgaagggtgctccct 179
>41770_bdi-MIR319:mirbase
Length = 280
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggtgctccctc 182
|||||||||||||||| ||||||||
Sbjct: 223 tgcttggactgaagggagctccctc 247
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 aagagagcgtccttcagtccactca 30
|||||||| ||||||||||||||||
Sbjct: 9 aagagagcttccttcagtccactca 33
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 153 gtctttgcttggactgaagggtgctccct 181
|||| |||||||||||||||| |||||||
Sbjct: 154 gtctgtgcttggactgaagggagctccct 182
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 50 attagctgccgactcattca 69
||||||||||||||||||||
Sbjct: 54 attagctgccgactcattca 73
>40464_gma-MIR319a:mirbase
Length = 207
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattca 69
|||||||||||||||||||||
Sbjct: 62 aattagctgccgactcattca 82
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 107 gcagatgagtgaatgaagcgggag 130
|||||||||||||||| |||||||
Sbjct: 118 gcagatgagtgaatgatgcgggag 141
>40069_ath-MIR319a:mirbase
Length = 176
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 154 tctttgcttggactgaagggtgctccctc 182
|||||| ||||||||||||| ||||||||
Sbjct: 147 tctttgattggactgaagggagctccctc 175
>39858_aly-MIR319a:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 154 tctttgcttggactgaagggtgctccctc 182
|||||| ||||||||||||| ||||||||
Sbjct: 170 tctttgattggactgaagggagctccctc 198
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 50 attagctgccgactcattca 69
||||||||||||||||||||
Sbjct: 54 attagctgccgactcattca 73
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggtgctccct 181
|||||||||||||||| |||||||
Sbjct: 162 tgcttggactgaagggagctccct 185
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 50 attagctgccgactcattca 69
||||||||||||||||||||
Sbjct: 54 attagctgccgactcattca 73
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggtgctccct 181
|||||||||||||||| |||||||
Sbjct: 165 tgcttggactgaagggagctccct 188
>40369_rco-MIR319c:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggtgctccct 181
|||||||||||||||| |||||||
Sbjct: 160 tgcttggactgaagggagctccct 183
>40368_rco-MIR319b:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 160 cttggactgaagggtgctccctcc 183
|||||||||||||| |||||||||
Sbjct: 153 cttggactgaagggagctccctcc 176
>40070_ath-MIR319b:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggtgctccct 181
|||||||||||||||| |||||||
Sbjct: 149 tgcttggactgaagggagctccct 172
>39859_aly-MIR319b:mirbase
Length = 246
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggtgctccct 181
|||||||||||||||| |||||||
Sbjct: 188 tgcttggactgaagggagctccct 211
