miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37580_ngi-mir-137:mirbase
Length = 83
Score = 165 bits (83), Expect = 7e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 12 ccaggttggcgacgcgtattcttggggaattaacacacatacgcgctgttattgcttgag 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaggttggcgacgcgtattcttggggaattaacacacatacgcgctgttattgcttgag 60
Query: 72 aatacacgtagtttgcctggtcg 94
|||||||||||||||||||||||
Sbjct: 61 aatacacgtagtttgcctggtcg 83
>37612_nlo-mir-137:mirbase
Length = 83
Score = 165 bits (83), Expect = 7e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 12 ccaggttggcgacgcgtattcttggggaattaacacacatacgcgctgttattgcttgag 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaggttggcgacgcgtattcttggggaattaacacacatacgcgctgttattgcttgag 60
Query: 72 aatacacgtagtttgcctggtcg 94
|||||||||||||||||||||||
Sbjct: 61 aatacacgtagtttgcctggtcg 83
>35370_ame-mir-137:mirbase
Length = 100
Score = 149 bits (75), Expect = 4e-37
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 12 ccaggttggcgacgcgtattcttggggaattaacacacatacgcgctgttattgcttgag 71
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 12 ccaggttggcgacgcgtattcttggggaattaacacacatttgcgctgttattgcttgag 71
Query: 72 aatacacgtagtttgcctggtcg 94
|||||||||||||||||||||||
Sbjct: 72 aatacacgtagtttgcctggtcg 94
>35540_bmo-mir-137:mirbase
Length = 90
Score = 79.8 bits (40), Expect = 3e-16
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 23 acgcgtattcttggggaattaacacacatacgcgctgttattgcttgagaatacacgtag 82
|||||||||||||||||||||||||| || | | |||||||||||||||||||||||||
Sbjct: 18 acgcgtattcttggggaattaacacatatgtgagatgttattgcttgagaatacacgtag 77
>37745_tca-mir-137:mirbase
Length = 77
Score = 58.0 bits (29), Expect = 1e-09
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 27 gtattcttggggaattaacacacatac-gcgctgttattgcttgagaatacacgtag 82
||||||||||| |||||||||| || | | | |||||||||||||||||||||||||
Sbjct: 14 gtattcttgggtaattaacacatattcagggatgttattgcttgagaatacacgtag 70
>37746_tca-mir-137:mirbase
Length = 77
Score = 58.0 bits (29), Expect = 1e-09
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 27 gtattcttggggaattaacacacatac-gcgctgttattgcttgagaatacacgtag 82
||||||||||| |||||||||| || | | | |||||||||||||||||||||||||
Sbjct: 14 gtattcttgggtaattaacacatattcagggatgttattgcttgagaatacacgtag 70
>35064_api-mir-137:mirbase
Length = 82
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 57 ctgttattgcttgagaatacacgtagtt 84
||||||||||||||||||||||||||||
Sbjct: 48 ctgttattgcttgagaatacacgtagtt 75
>36936_dps-mir-137:mirbase
Length = 111
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagttt 85
||||||||||||||||||||||||||||
Sbjct: 62 tgttattgcttgagaatacacgtagttt 89
>35194_aae-mir-137-1:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 60 tgttattgcttgagaatacacgtagtt 86
>35195_aae-mir-137-2:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 62 tgttattgcttgagaatacacgtagtt 88
>35292_aga-mir-137:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 52 tgttattgcttgagaatacacgtagtt 78
>36024_cqu-mir-137:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 50 tgttattgcttgagaatacacgtagtt 76
>36391_dme-mir-137:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 51 tgttattgcttgagaatacacgtagtt 77
>36392_dme-mir-137:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 51 tgttattgcttgagaatacacgtagtt 77
>37223_dsi-mir-137:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 62 tgttattgcttgagaatacacgtagtt 88
>31494_oan-mir-137b:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 54 gcgctgttattgcttgagaatacacgtagt 83
||||||||||||||||||||||| ||||||
Sbjct: 47 gcgctgttattgcttgagaatacgcgtagt 76
>34825_spu-mir-137:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagt 83
||||||||||||||||||||||||||
Sbjct: 44 tgttattgcttgagaatacacgtagt 69
>38754_cte-mir-137:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtag 82
|||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtag 82
>34881_sko-mir-137:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtag 82
|||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtag 82
>34973_isc-mir-137:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 gctgttattgcttgagaatacacgt 80
|||||||||||||||||||||||||
Sbjct: 56 gctgttattgcttgagaatacacgt 80
>38869_lgi-mir-137:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgta 81
||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgta 81
>25489_pma-mir-137-1:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 55 cgctgttattgcttgagaatacacgtag 82
|||||||||||||| |||||||||||||
Sbjct: 48 cgctgttattgcttaagaatacacgtag 75
>35013_dpu-mir-137:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgt 80
|||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgt 80
>34747_tni-mir-137:mirbase
Length = 70
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagt 83
||||||||||||||||||| ||||||
Sbjct: 41 tgttattgcttgagaatacgcgtagt 66
>24683_bfl-mir-137:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ttattgcttgagaatacacgt 80
|||||||||||||||||||||
Sbjct: 60 ttattgcttgagaatacacgt 80
>25490_pma-mir-137-2:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtag 82
||||||||||| |||||||||||||
Sbjct: 51 tgttattgcttaagaatacacgtag 75
>34952_xbo-mir-137:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ttattgcttgagaatacacgt 80
|||||||||||||||||||||
Sbjct: 53 ttattgcttgagaatacacgt 73
>38117_bma-mir-137:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaataca 77
||||||||||||||||||||
Sbjct: 53 tgttattgcttgagaataca 72
