miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37585_ngi-mir-263b:mirbase
          Length = 86

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtggatct 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6  ctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtggatct 65

                               
Query: 61 tgcaatgccattacccgctgg 81
          |||||||||||||||||||||
Sbjct: 66 tgcaatgccattacccgctgg 86




>37616_nlo-mir-263b:mirbase
          Length = 86

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtggatct 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6  ctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtggatct 65

                               
Query: 61 tgcaatgccattacccgctgg 81
          |||||||||||||||||||||
Sbjct: 66 tgcaatgccattacccgctgg 86




>35378_ame-mir-263b:mirbase
          Length = 91

 Score = 97.6 bits (49), Expect = 1e-21
 Identities = 66/71 (92%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtggatct 60
          ||||||||||||||||||||||||||||||||||||||    |||| |||||||||||||
Sbjct: 7  ctggcgggtcttggcactggaagaattcacagatgtgc---agtgtataatcgtggatct 63

                     
Query: 61 tgcaatgccat 71
          |||||||||||
Sbjct: 64 tgcaatgccat 74




>37764_tca-mir-263b:mirbase
          Length = 75

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 cttggcactggaagaattcacagat 34
          |||||||||||||||||||||||||
Sbjct: 10 cttggcactggaagaattcacagat 34




>37763_tca-mir-263b:mirbase
          Length = 75

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 cttggcactggaagaattcacagat 34
          |||||||||||||||||||||||||
Sbjct: 10 cttggcactggaagaattcacagat 34




>35020_dpu-mir-263b:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 cttggcactggaagaattcacaga 33
          ||||||||||||||||||||||||
Sbjct: 7  cttggcactggaagaattcacaga 30




>35074_api-mir-263b:mirbase
          Length = 62

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 cttggcactggaagaattcacaga 33
          ||||||||||||||||||||||||
Sbjct: 1  cttggcactggaagaattcacaga 24




>36192_der-mir-263b:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 8  gtcttggcactggaagaattcacag 32
          ||||||||||||| |||||||||||
Sbjct: 14 gtcttggcactgggagaattcacag 38




>36407_dme-mir-263b:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 8  gtcttggcactggaagaattcacag 32
          ||||||||||||| |||||||||||
Sbjct: 14 gtcttggcactgggagaattcacag 38




>36408_dme-mir-263b:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 8  gtcttggcactggaagaattcacag 32
          ||||||||||||| |||||||||||
Sbjct: 14 gtcttggcactgggagaattcacag 38




>37152_dse-mir-263b:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 8  gtcttggcactggaagaattcacag 32
          ||||||||||||| |||||||||||
Sbjct: 14 gtcttggcactgggagaattcacag 38




>37231_dsi-mir-263b:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 8  gtcttggcactggaagaattcacag 32
          ||||||||||||| |||||||||||
Sbjct: 14 gtcttggcactgggagaattcacag 38




>37520_dya-mir-263b-1:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 8  gtcttggcactggaagaattcacag 32
          ||||||||||||| |||||||||||
Sbjct: 13 gtcttggcactgggagaattcacag 37




>37521_dya-mir-263b-2:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 8  gtcttggcactggaagaattcacag 32
          ||||||||||||| |||||||||||
Sbjct: 13 gtcttggcactgggagaattcacag 37




>36114_dan-mir-263b:mirbase
          Length = 89

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 9  tcttggcactggaagaattcacag 32
          |||||||||||| |||||||||||
Sbjct: 14 tcttggcactgggagaattcacag 37




>36281_dgr-mir-263b:mirbase
          Length = 75

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 9  tcttggcactggaagaattcacag 32
          |||||||||||| |||||||||||
Sbjct: 8  tcttggcactgggagaattcacag 31




>36866_dpe-mir-263b:mirbase
          Length = 92

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 9  tcttggcactggaagaattcacag 32
          |||||||||||| |||||||||||
Sbjct: 15 tcttggcactgggagaattcacag 38




>36945_dps-mir-263b:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 9  tcttggcactggaagaattcacag 32
          |||||||||||| |||||||||||
Sbjct: 15 tcttggcactgggagaattcacag 38




>37366_dvi-mir-263b:mirbase
          Length = 71

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 9  tcttggcactggaagaattcacag 32
          |||||||||||| |||||||||||
Sbjct: 5  tcttggcactgggagaattcacag 28




>37445_dwi-mir-263b:mirbase
          Length = 70

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 9  tcttggcactggaagaattcacag 32
          |||||||||||| |||||||||||
Sbjct: 2  tcttggcactgggagaattcacag 25




>34978_isc-mir-263a:mirbase
          Length = 100

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 23 tggcactggaagaattcac 41




>35019_dpu-mir-263a:mirbase
          Length = 101

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 22 tggcactggaagaattcac 40




>35202_aae-mir-263a:mirbase
          Length = 97

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 16 tggcactggaagaattcac 34




>35203_aae-mir-263b:mirbase
          Length = 91

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 cttggcactggaagaattcacag 32
          ||||||||||| |||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37




>35297_aga-mir-263:mirbase
          Length = 86

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 16 tggcactggaagaattcac 34




>35298_aga-mir-263b:mirbase
          Length = 96

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 cttggcactggaagaattcacag 32
          ||||||||||| |||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38




>35377_ame-mir-263:mirbase
          Length = 91

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36




>35545_bmo-mir-263a:mirbase
          Length = 95

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 21 tggcactggaagaattcac 39




>35546_bmo-mir-263b:mirbase
          Length = 89

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 cttggcactggaagaattcacag 32
          ||||||||||| |||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37




>36030_cqu-mir-263:mirbase
          Length = 76

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 11 tggcactggaagaattcac 29




>36113_dan-mir-263a:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 17 tggcactggaagaattcac 35




>36191_der-mir-263a:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36




>36280_dgr-mir-263a:mirbase
          Length = 89

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 17 tggcactggaagaattcac 35




>36405_dme-mir-263a:mirbase
          Length = 94

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 20 tggcactggaagaattcac 38




>36406_dme-mir-263a:mirbase
          Length = 94

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 20 tggcactggaagaattcac 38




>36789_dmo-mir-263a:mirbase
          Length = 89

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 17 tggcactggaagaattcac 35




>36865_dpe-mir-263a:mirbase
          Length = 89

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36




>36944_dps-mir-263a:mirbase
          Length = 92

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 19 tggcactggaagaattcac 37




>37105_dps-mir-3983:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 71 tggcactggaagaattcac 53




>37151_dse-mir-263a:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36




>37230_dsi-mir-263a:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36




>37365_dvi-mir-263a:mirbase
          Length = 89

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 17 tggcactggaagaattcac 35




>37444_dwi-mir-263a:mirbase
          Length = 91

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 17 tggcactggaagaattcac 35




>37519_dya-mir-263a:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36




>37761_tca-mir-263a:mirbase
          Length = 91

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 20 tggcactggaagaattcac 38




>37762_tca-mir-263a:mirbase
          Length = 91

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggcactggaagaattcac 30
          |||||||||||||||||||
Sbjct: 20 tggcactggaagaattcac 38