miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37621_nlo-mir-282:mirbase
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 14 tgatttagcctctcctaggctttgtctgtcagtgaaaaaacgagacatagcctagaatag 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatttagcctctcctaggctttgtctgtcagtgaaaaaacgagacatagcctagaatag 60
Query: 74 gttaggtcggggctcgttc 92
|||||||||||||||||||
Sbjct: 61 gttaggtcggggctcgttc 79
>35387_ame-mir-282:mirbase
Length = 92
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 14 tgatttagcctctcctaggctttgtctgtcagtgaaaaaacgagacatagcctagaatag 73
||||||||||||||||||||||||||||| | || || |||||||||||||||||||
Sbjct: 14 tgatttagcctctcctaggctttgtctgtatataaagaacggagacatagcctagaatag 73
Query: 74 gttaggtcggggctcgttc 92
|||||||| ||||||||||
Sbjct: 74 gttaggtcagggctcgttc 92
>35211_aae-mir-282-1:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
||||||||||||||||||||||||
Sbjct: 33 tagcctctcctaggctttgtctgt 56
>35212_aae-mir-282-2:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
||||||||||||||||||||||||
Sbjct: 33 tagcctctcctaggctttgtctgt 56
>37783_tca-mir-282:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
||||||||||||||||||||||||
Sbjct: 9 tagcctctcctaggctttgtctgt 32
>37784_tca-mir-282:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
||||||||||||||||||||||||
Sbjct: 9 tagcctctcctaggctttgtctgt 32
>35306_aga-mir-282:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 16 tagcctcttctaggctttgtctgt 39
>35558_bmo-mir-282:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
||||||||||| ||||||||||||
Sbjct: 14 tagcctctccttggctttgtctgt 37
>36125_dan-mir-282:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 14 tagcctctactaggctttgtctgt 37
>36203_der-mir-282:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 17 tagcctctactaggctttgtctgt 40
>36292_dgr-mir-282:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 14 tagcctctactaggctttgtctgt 37
>36428_dme-mir-282:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 17 tagcctctactaggctttgtctgt 40
>36429_dme-mir-282:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 17 tagcctctactaggctttgtctgt 40
>36800_dmo-mir-282:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 15 tagcctctactaggctttgtctgt 38
>36877_dpe-mir-282:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 14 tagcctctactaggctttgtctgt 37
>36957_dps-mir-282:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 14 tagcctctactaggctttgtctgt 37
>37163_dse-mir-282:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 17 tagcctctactaggctttgtctgt 40
>37239_dsi-mir-282:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 17 tagcctctactaggctttgtctgt 40
>37377_dvi-mir-282:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 17 tagcctctactaggctttgtctgt 40
>37456_dwi-mir-282:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 15 tagcctctactaggctttgtctgt 38
>37532_dya-mir-282:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 tagcctctcctaggctttgtctgt 42
|||||||| |||||||||||||||
Sbjct: 14 tagcctctactaggctttgtctgt 37
