miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35415_ame-mir-2796:mirbase
Length = 128
Score = 101 bits (51), Expect = 8e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 9 aaggttaggggtttctatcggcctccagcagctaagacagctgtaggccggcggaaacta 68
|||||||||||||||||||||||||||||||| | || | |||||||||||||||||||
Sbjct: 29 aaggttaggggtttctatcggcctccagcagcaacgatggttgtaggccggcggaaacta 88
Query: 69 cttgctcttgt 79
|||||||||||
Sbjct: 89 cttgctcttgt 99
>37836_tca-mir-2796:mirbase
Length = 158
Score = 56.0 bits (28), Expect = 4e-09
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 14 taggggtttctatcggcctccagcagctaagacagc--tgtaggccggcggaaactactt 71
||||||||||| |||||||||||| | ||| | || ||||||||||||||||||||||
Sbjct: 48 taggggtttctttcggcctccagcggataataaagagttgtaggccggcggaaactactt 107
Query: 72 gct 74
|||
Sbjct: 108 gct 110
>37837_tca-mir-2796:mirbase
Length = 158
Score = 56.0 bits (28), Expect = 4e-09
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 14 taggggtttctatcggcctccagcagctaagacagc--tgtaggccggcggaaactactt 71
||||||||||| |||||||||||| | ||| | || ||||||||||||||||||||||
Sbjct: 48 taggggtttctttcggcctccagcggataataaagagttgtaggccggcggaaactactt 107
Query: 72 gct 74
|||
Sbjct: 108 gct 110
>35680_bmo-mir-2796:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 ctgtaggccggcggaaactacttgc 73
|||||||||||||||||||||||||
Sbjct: 45 ctgtaggccggcggaaactacttgc 69
>35681_bmo-mir-2796:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 ctgtaggccggcggaaactacttgc 73
|||||||||||||||||||||||||
Sbjct: 45 ctgtaggccggcggaaactacttgc 69
>35101_api-mir-2796:mirbase
Length = 63
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 tgtaggccggcggaaactact 70
|||||||||||||||||||||
Sbjct: 41 tgtaggccggcggaaactact 61
