miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37700_tca-mir-9b:mirbase
Length = 169
Score = 335 bits (169), Expect = 6e-93
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 1 ttgacgaccgtaagtttctttgtttttggttccaacaggtgggggccgattttgttactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgacgaccgtaagtttctttgtttttggttccaacaggtgggggccgattttgttactt 60
Query: 61 tggtaatttagcgtttgtgattttatttgagtcataaagctagattaccaaagcaatgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtaatttagcgtttgtgattttatttgagtcataaagctagattaccaaagcaatgcg 120
Query: 121 gttggcattgcgtcgtggagattggagttggaataagaagacgttcatt 169
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttggcattgcgtcgtggagattggagttggaataagaagacgttcatt 169
>35346_ame-mir-9b:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 92 tcataaagctagattaccaaagcaa 116
|||||||||||||||||||||||||
Sbjct: 40 tcataaagctagattaccaaagcaa 16
>35360_ame-mir-79:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagcaa 116
|||||||||||||||||||||||||
Sbjct: 64 tcataaagctagattaccaaagcaa 88
>35186_aae-mir-79:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 53 tcataaagctagattaccaaagca 76
>35284_aga-mir-79:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 56 tcataaagctagattaccaaagca 79
>35520_bmo-mir-9b:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 39 tcataaagctagattaccaaagca 16
>35533_bmo-mir-79:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 56 tcataaagctagattaccaaagca 79
>36016_cqu-mir-79:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 46 tcataaagctagattaccaaagca 69
>36102_dan-mir-79:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 53 tcataaagctagattaccaaagca 76
>36180_der-mir-79:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 54 tcataaagctagattaccaaagca 77
>36268_dgr-mir-79:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 46 tcataaagctagattaccaaagca 69
>36375_dme-mir-79:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 57 tcataaagctagattaccaaagca 80
>36376_dme-mir-79:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 57 tcataaagctagattaccaaagca 80
>36778_dmo-mir-79:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 46 tcataaagctagattaccaaagca 69
>36851_dpe-mir-79:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 47 tcataaagctagattaccaaagca 70
>36927_dps-mir-79:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 52 tcataaagctagattaccaaagca 75
>37140_dse-mir-79:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 54 tcataaagctagattaccaaagca 77
>37354_dvi-mir-79:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 54 tcataaagctagattaccaaagca 77
>37431_dwi-mir-79-1:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 46 tcataaagctagattaccaaagca 69
>37432_dwi-mir-79-2:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 46 tcataaagctagattaccaaagca 69
>37508_dya-mir-79:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 tcataaagctagattaccaaagca 115
||||||||||||||||||||||||
Sbjct: 54 tcataaagctagattaccaaagca 77
