miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37707_tca-mir-11:mirbase
          Length = 106

 Score =  210 bits (106), Expect = 2e-55
 Identities = 106/106 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaacgcttacattgtaaatgcattctgggattctgactgtgacctgtgtgtgtctgatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   caaacgcttacattgtaaatgcattctgggattctgactgtgacctgtgtgtgtctgatt 60

                                                         
Query: 61  cacatcacaggcagagttctagctatgcgtttacagcttgcttctc 106
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cacatcacaggcagagttctagctatgcgtttacagcttgcttctc 106




>35350_ame-mir-11:mirbase
          Length = 108

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 tcacatcacaggcagagttctag 82
          |||||||||||||||||||||||
Sbjct: 63 tcacatcacaggcagagttctag 85




>35524_bmo-mir-11:mirbase
          Length = 76

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 60 tcacatcacaggcagagttctagcta 85
          ||||||||||| ||||||||||||||
Sbjct: 42 tcacatcacagtcagagttctagcta 67