miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37709_tca-mir-12:mirbase
Length = 87
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 taaaagttcagggtttgagtattacatcaggtactggttcggttttgaaaaaccggtccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaaagttcagggtttgagtattacatcaggtactggttcggttttgaaaaaccggtccc 60
Query: 61 tgagtaacacttacattctggctttta 87
|||||||||||||||||||||||||||
Sbjct: 61 tgagtaacacttacattctggctttta 87
>37638_nvi-mir-12:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 10 agggtttgagtattacatcaggtactggt 38
||||| |||||||||||||||||||||||
Sbjct: 7 agggtgtgagtattacatcaggtactggt 35
>35002_dpu-mir-12:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tgagtattacatcaggtactggtt 39
||||||||||||||||||||||||
Sbjct: 21 tgagtattacatcaggtactggtt 44
>35351_ame-mir-12:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 gggtttgagtattacatcaggtactggt 38
|||| |||||||||||||||||||||||
Sbjct: 8 gggtgtgagtattacatcaggtactggt 35
>36010_cqu-mir-12:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttgagtattacatcaggtactggt 38
||||||||||||||||||||||||
Sbjct: 65 ttgagtattacatcaggtactggt 88
>36171_der-mir-12:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttgagtattacatcaggtactggt 38
||||||||||||||||||||||||
Sbjct: 6 ttgagtattacatcaggtactggt 29
>36259_dgr-mir-12:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttgagtattacatcaggtactggt 38
||||||||||||||||||||||||
Sbjct: 6 ttgagtattacatcaggtactggt 29
>36357_dme-mir-12:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttgagtattacatcaggtactggt 38
||||||||||||||||||||||||
Sbjct: 6 ttgagtattacatcaggtactggt 29
>36358_dme-mir-12:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttgagtattacatcaggtactggt 38
||||||||||||||||||||||||
Sbjct: 6 ttgagtattacatcaggtactggt 29
>36769_dmo-mir-12:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttgagtattacatcaggtactggt 38
||||||||||||||||||||||||
Sbjct: 6 ttgagtattacatcaggtactggt 29
>37131_dse-mir-12:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttgagtattacatcaggtactggt 38
||||||||||||||||||||||||
Sbjct: 6 ttgagtattacatcaggtactggt 29
>37207_dsi-mir-12:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttgagtattacatcaggtactggt 38
||||||||||||||||||||||||
Sbjct: 6 ttgagtattacatcaggtactggt 29
>37345_dvi-mir-12:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttgagtattacatcaggtactggt 38
||||||||||||||||||||||||
Sbjct: 6 ttgagtattacatcaggtactggt 29
>37422_dwi-mir-12:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttgagtattacatcaggtactggt 38
||||||||||||||||||||||||
Sbjct: 6 ttgagtattacatcaggtactggt 29
>37605_nlo-mir-12:mirbase
Length = 64
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 gggtttgagtattacatcaggtactggt 38
|||| |||||||||||||||||||||||
Sbjct: 1 gggtgtgagtattacatcaggtactggt 28
>34965_isc-mir-12:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tgagtattacatcaggtactggt 38
|||||||||||||||||||||||
Sbjct: 21 tgagtattacatcaggtactggt 43
>35179_aae-mir-12:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tgagtattacatcaggtactggt 38
|||||||||||||||||||||||
Sbjct: 8 tgagtattacatcaggtactggt 30
>35280_aga-mir-12:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tgagtattacatcaggtactggt 38
|||||||||||||||||||||||
Sbjct: 7 tgagtattacatcaggtactggt 29
>36093_dan-mir-12:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tgagtattacatcaggtactggt 38
|||||||||||||||||||||||
Sbjct: 7 tgagtattacatcaggtactggt 29
>36842_dpe-mir-12:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tgagtattacatcaggtactggt 38
|||||||||||||||||||||||
Sbjct: 7 tgagtattacatcaggtactggt 29
>36918_dps-mir-12:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tgagtattacatcaggtactggt 38
|||||||||||||||||||||||
Sbjct: 7 tgagtattacatcaggtactggt 29
>38854_lgi-mir-12:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgagtattacatcaggtactg 36
|||||||||||||||||||||
Sbjct: 21 tgagtattacatcaggtactg 41
>38734_cte-mir-12:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tgagtattacatcaggtactg 36
|||||||||||||||||||||
Sbjct: 21 tgagtattacatcaggtactg 41
>35525_bmo-mir-12:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tgagtattacatcaggtactggtt 39
|||||||||| |||||||||||||
Sbjct: 4 tgagtattacttcaggtactggtt 27
