miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37711_tca-mir-13a:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 gagatgcccaagtcgtcaatttggttgtgaactcttaatttaaacgatatcacagccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagatgcccaagtcgtcaatttggttgtgaactcttaatttaaacgatatcacagccact 60
Query: 61 ttgatgagcttggttgtctt 80
||||||||||||||||||||
Sbjct: 61 ttgatgagcttggttgtctt 80
>35051_api-mir-13a:mirbase
Length = 61
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 atatcacagccactttgatgagc 69
|||||||||||||||||||||||
Sbjct: 39 atatcacagccactttgatgagc 61
>35352_ame-mir-13a:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 atatcacagccactttgatgagcttgg 73
|||||||||||| ||||||||||||||
Sbjct: 63 atatcacagccattttgatgagcttgg 89
>37572_ngi-mir-13a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 atatcacagccactttgatgagcttgg 73
|||||||||||| ||||||||||||||
Sbjct: 50 atatcacagccattttgatgagcttgg 76
>37606_nlo-mir-13a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 atatcacagccactttgatgagcttgg 73
|||||||||||| ||||||||||||||
Sbjct: 50 atatcacagccattttgatgagcttgg 76
>37639_nvi-mir-13a:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 atatcacagccactttgatgagcttgg 73
|||||||||||| ||||||||||||||
Sbjct: 66 atatcacagccattttgatgagcttgg 92
>35526_bmo-mir-13a:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 atatcacagccactttgatg 66
||||||||||||||||||||
Sbjct: 49 atatcacagccactttgatg 68
