miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37714_tca-mir-13b:mirbase
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 tgccctatcagtcaatttggttgtgaaacctagtatttattcgggtatcacagccatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgccctatcagtcaatttggttgtgaaacctagtatttattcgggtatcacagccatttt 60
Query: 61 gacgagtttggttg 74
||||||||||||||
Sbjct: 61 gacgagtttggttg 74
>36095_dan-mir-13b-1:mirbase
Length = 69
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 44 tatcacagccattttgacgagtttgg 69
>36173_der-mir-13b-1:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttgg 68
>36261_dgr-mir-13b-1:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttgg 68
>36361_dme-mir-13b-1:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttgg 68
>36362_dme-mir-13b-1:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttgg 68
>36771_dmo-mir-13b-1:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttgg 68
>36844_dpe-mir-13b-1:mirbase
Length = 69
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 44 tatcacagccattttgacgagtttgg 69
>36920_dps-mir-13b-1:mirbase
Length = 69
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 44 tatcacagccattttgacgagtttgg 69
>37133_dse-mir-13b-1:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttgg 68
>37209_dsi-mir-13b-1:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttgg 68
>37347_dvi-mir-13b-1:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttgg 68
>37424_dwi-mir-13b-1:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 46 tatcacagccattttgacgagtttgg 71
>37501_dya-mir-13b-1:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttgg 71
||||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagtttgg 68
>35281_aga-mir-13b:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 56 tatcacagccattttgacgagtttg 80
>36011_cqu-mir-13:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 55 tatcacagccattttgacgagtttg 79
>36096_dan-mir-13b-2:mirbase
Length = 66
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 42 tatcacagccattttgacgagtttg 66
>36174_der-mir-13b-2:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 44 tatcacagccattttgacgagtttg 68
>36262_dgr-mir-13b-2:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 49 tatcacagccattttgacgagtttg 73
>36363_dme-mir-13b-2:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 46 tatcacagccattttgacgagtttg 70
>36364_dme-mir-13b-2:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 46 tatcacagccattttgacgagtttg 70
>36921_dps-mir-13b-2:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 45 tatcacagccattttgacgagtttg 69
>37134_dse-mir-13b-2:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 44 tatcacagccattttgacgagtttg 68
>37210_dsi-mir-13b-2:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 44 tatcacagccattttgacgagtttg 68
>37348_dvi-mir-13b-2:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 49 tatcacagccattttgacgagtttg 73
>37502_dya-mir-13b-2:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtttg 70
|||||||||||||||||||||||||
Sbjct: 44 tatcacagccattttgacgagtttg 68
>36772_dmo-mir-13b-2:mirbase
Length = 67
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||||||||||
Sbjct: 44 tatcacagccattttgacgagttt 67
>36845_dpe-mir-13b-2:mirbase
Length = 66
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||||||||||
Sbjct: 43 tatcacagccattttgacgagttt 66
>35180_aae-mir-13:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtt 68
|||||||||||||||||||||||
Sbjct: 54 tatcacagccattttgacgagtt 76
>37425_dwi-mir-13b-2:mirbase
Length = 67
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagtt 68
|||||||||||||||||||||||
Sbjct: 44 tatcacagccattttgacgagtt 66
>36094_dan-mir-13a:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 47 tatcacagccattttgatgagttt 70
>36172_der-mir-13a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 48 tatcacagccattttgatgagttt 71
>36260_dgr-mir-13a:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 47 tatcacagccattttgatgagttt 70
>36359_dme-mir-13a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 48 tatcacagccattttgatgagttt 71
>36360_dme-mir-13a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 48 tatcacagccattttgatgagttt 71
>36770_dmo-mir-13a:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 47 tatcacagccattttgatgagttt 70
>36843_dpe-mir-13a:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 47 tatcacagccattttgatgagttt 70
>36919_dps-mir-13a:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 47 tatcacagccattttgatgagttt 70
>37132_dse-mir-13a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 48 tatcacagccattttgatgagttt 71
>37208_dsi-mir-13a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 48 tatcacagccattttgatgagttt 71
>37346_dvi-mir-13a:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 47 tatcacagccattttgatgagttt 70
>37423_dwi-mir-13a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 51 tatcacagccattttgatgagttt 74
>37500_dya-mir-13a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tatcacagccattttgacgagttt 69
||||||||||||||||| ||||||
Sbjct: 48 tatcacagccattttgatgagttt 71
