miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37748_tca-mir-184:mirbase
Length = 79
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 ttttcttccagtcccttgtcattctctcgcccggtgtattttaacaactggacggagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttcttccagtcccttgtcattctctcgcccggtgtattttaacaactggacggagaac 60
Query: 61 tgataagggcttgtgggaa 79
|||||||||||||||||||
Sbjct: 61 tgataagggcttgtgggaa 79
>38873_lgi-mir-184:mirbase
Length = 101
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 46 aactggacggagaactgataagggcttgtggg 77
||||||||||||||||||||||||||||||||
Sbjct: 58 aactggacggagaactgataagggcttgtggg 89
>35065_api-mir-184a:mirbase
Length = 65
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 38 attttaacaactggacggagaactgataagggct 71
|||| |||||||||||||||||||||||||||||
Sbjct: 27 atttaaacaactggacggagaactgataagggct 60
>34885_sko-mir-184:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 48 ctggacggagaactgataagggcttgtgg 76
|||||||||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggcttgtgg 88
>34975_isc-mir-184:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 48 ctggacggagaactgataagggcttgtgg 76
|||||||||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggcttgtgg 88
>35293_aga-mir-184:mirbase
Length = 82
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 42 taacaactggacggagaactgataagggc 70
|||||||||||||||||||||||||||||
Sbjct: 44 taacaactggacggagaactgataagggc 72
>36188_der-mir-184:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 9e-10
Identities = 56/63 (88%), Gaps = 4/63 (6%)
Strand = Plus / Plus
Query: 13 cccttgtcattctctcgcccggtgt--atttta--acaactggacggagaactgataagg 68
||||| |||||||||||||| |||| |||| | |||||||||||||||||||||||||
Sbjct: 15 cccttatcattctctcgccccgtgtgcatttaaagacaactggacggagaactgataagg 74
Query: 69 gct 71
|||
Sbjct: 75 gct 77
>37148_dse-mir-184:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 9e-10
Identities = 56/63 (88%), Gaps = 4/63 (6%)
Strand = Plus / Plus
Query: 13 cccttgtcattctctcgcccggtgt--atttta--acaactggacggagaactgataagg 68
||||| |||||||||||||| |||| |||| | |||||||||||||||||||||||||
Sbjct: 15 cccttatcattctctcgccccgtgtgcatttaaagacaactggacggagaactgataagg 74
Query: 69 gct 71
|||
Sbjct: 75 gct 77
>37224_dsi-mir-184:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 9e-10
Identities = 56/63 (88%), Gaps = 4/63 (6%)
Strand = Plus / Plus
Query: 13 cccttgtcattctctcgcccggtgt--atttta--acaactggacggagaactgataagg 68
||||| |||||||||||||| |||| |||| | |||||||||||||||||||||||||
Sbjct: 15 cccttatcattctctcgccccgtgtgcatttaaagacaactggacggagaactgataagg 74
Query: 69 gct 71
|||
Sbjct: 75 gct 77
>36110_dan-mir-184:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 acaactggacggagaactgataagggct 71
||||||||||||||||||||||||||||
Sbjct: 50 acaactggacggagaactgataagggct 77
>36277_dgr-mir-184:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 acaactggacggagaactgataagggct 71
||||||||||||||||||||||||||||
Sbjct: 50 acaactggacggagaactgataagggct 77
>36393_dme-mir-184:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 acaactggacggagaactgataagggct 71
||||||||||||||||||||||||||||
Sbjct: 56 acaactggacggagaactgataagggct 83
>36394_dme-mir-184:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 acaactggacggagaactgataagggct 71
||||||||||||||||||||||||||||
Sbjct: 56 acaactggacggagaactgataagggct 83
>36786_dmo-mir-184:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 acaactggacggagaactgataagggct 71
||||||||||||||||||||||||||||
Sbjct: 54 acaactggacggagaactgataagggct 81
>36862_dpe-mir-184:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 acaactggacggagaactgataagggct 71
||||||||||||||||||||||||||||
Sbjct: 50 acaactggacggagaactgataagggct 77
>36937_dps-mir-184:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 acaactggacggagaactgataagggct 71
||||||||||||||||||||||||||||
Sbjct: 56 acaactggacggagaactgataagggct 83
>37362_dvi-mir-184:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 acaactggacggagaactgataagggct 71
||||||||||||||||||||||||||||
Sbjct: 54 acaactggacggagaactgataagggct 81
>37441_dwi-mir-184:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 acaactggacggagaactgataagggct 71
||||||||||||||||||||||||||||
Sbjct: 50 acaactggacggagaactgataagggct 77
>37516_dya-mir-184:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 acaactggacggagaactgataagggct 71
||||||||||||||||||||||||||||
Sbjct: 49 acaactggacggagaactgataagggct 76
>38757_cte-mir-184a:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 47 actggacggagaactgataagggcttgtg 75
|||||||||||||||||||||||| ||||
Sbjct: 59 actggacggagaactgataagggcctgtg 87
>34829_spu-mir-184:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 ctggacggagaactgataagggctt 72
|||||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggctt 84
>34336_dre-mir-184-2:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataagggcttgtgg 76
|||||||||||||||||||||| |||||
Sbjct: 49 tggacggagaactgataagggcatgtgg 76
>35196_aae-mir-184:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 actggacggagaactgataagggc 70
||||||||||||||||||||||||
Sbjct: 53 actggacggagaactgataagggc 76
>35371_ame-mir-184:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 actggacggagaactgataagggc 70
||||||||||||||||||||||||
Sbjct: 54 actggacggagaactgataagggc 77
>35541_bmo-mir-184:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 actggacggagaactgataagggc 70
||||||||||||||||||||||||
Sbjct: 50 actggacggagaactgataagggc 73
>36025_cqu-mir-184:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 actggacggagaactgataagggc 70
||||||||||||||||||||||||
Sbjct: 50 actggacggagaactgataagggc 73
>37581_ngi-mir-184:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 actggacggagaactgataagggc 70
||||||||||||||||||||||||
Sbjct: 52 actggacggagaactgataagggc 75
>37613_nlo-mir-184:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 actggacggagaactgataagggc 70
||||||||||||||||||||||||
Sbjct: 52 actggacggagaactgataagggc 75
>37653_nvi-mir-184:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 actggacggagaactgataagggc 70
||||||||||||||||||||||||
Sbjct: 54 actggacggagaactgataagggc 77
>24688_bfl-mir-184:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 48 ctggacggagaactgataagggc 70
|||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggc 82
>24844_cin-mir-184:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataagggct 71
|||||||||||||||||||||||
Sbjct: 66 tggacggagaactgataagggct 88
>34335_dre-mir-184:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataagggcttgtg 75
|||||||||||||||||||||| ||||
Sbjct: 55 tggacggagaactgataagggcatgtg 81
>25979_gga-mir-184:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>26487_tgu-mir-184:mirbase
Length = 112
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 81 tggacggagaactgataaggg 101
>26739_cfa-mir-184:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 42 tggacggagaactgataaggg 62
>27065_eca-mir-184:mirbase
Length = 70
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 46 tggacggagaactgataaggg 66
>27408_mdo-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>27775_mml-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>28225_mne-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>28491_hsa-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>30259_ptr-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>30873_ppy-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>31900_mmu-mir-184:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 45 tggacggagaactgataaggg 65
>32770_rno-mir-184:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 47 tggacggagaactgataaggg 67
>33252_bta-mir-184:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72
>34014_ssc-mir-184:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72
>34616_fru-mir-184:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>34763_tni-mir-184:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataaggg 69
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>25809_xtr-mir-184:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tggacggagaactgataagg 68
||||||||||||||||||||
Sbjct: 53 tggacggagaactgataagg 72
>35066_api-mir-184b:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 actggacggagaactgataa 66
||||||||||||||||||||
Sbjct: 37 actggacggagaactgataa 56
>38758_cte-mir-184b:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 actggacggagaactgata 65
|||||||||||||||||||
Sbjct: 56 actggacggagaactgata 74
