miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37762_tca-mir-263a:mirbase
Length = 91
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 gtgagcataggcctgcgaatggcactggaagaattcacggggttcttcgcactcccgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgagcataggcctgcgaatggcactggaagaattcacggggttcttcgcactcccgtgg 60
Query: 61 actttgagtgccatcctcagagcccttgtcc 91
|||||||||||||||||||||||||||||||
Sbjct: 61 actttgagtgccatcctcagagcccttgtcc 91
>36280_dgr-mir-263a:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggtt 44
|||||||||||||||||||||||||||
Sbjct: 15 aatggcactggaagaattcacggggtt 41
>36789_dmo-mir-263a:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggtt 44
|||||||||||||||||||||||||||
Sbjct: 15 aatggcactggaagaattcacggggtt 41
>36865_dpe-mir-263a:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggtt 44
|||||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggtt 42
>36944_dps-mir-263a:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggtt 44
|||||||||||||||||||||||||||
Sbjct: 17 aatggcactggaagaattcacggggtt 43
>37105_dps-mir-3983:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 18 aatggcactggaagaattcacggggtt 44
|||||||||||||||||||||||||||
Sbjct: 73 aatggcactggaagaattcacggggtt 47
>37365_dvi-mir-263a:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggtt 44
|||||||||||||||||||||||||||
Sbjct: 15 aatggcactggaagaattcacggggtt 41
>37444_dwi-mir-263a:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggtt 44
|||||||||||||||||||||||||||
Sbjct: 15 aatggcactggaagaattcacggggtt 41
>34978_isc-mir-263a:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggt 43
||||||||||||||||||||||||||
Sbjct: 21 aatggcactggaagaattcacggggt 46
>36113_dan-mir-263a:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggt 43
||||||||||||||||||||||||||
Sbjct: 15 aatggcactggaagaattcacggggt 40
>36191_der-mir-263a:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggt 43
||||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggt 41
>36405_dme-mir-263a:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggt 43
||||||||||||||||||||||||||
Sbjct: 18 aatggcactggaagaattcacggggt 43
>36406_dme-mir-263a:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggt 43
||||||||||||||||||||||||||
Sbjct: 18 aatggcactggaagaattcacggggt 43
>37151_dse-mir-263a:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggt 43
||||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggt 41
>37230_dsi-mir-263a:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggt 43
||||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggt 41
>37519_dya-mir-263a:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggt 43
||||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggt 41
>35377_ame-mir-263:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacgggg 42
|||||||||||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacgggg 40
>35019_dpu-mir-263a:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggg 41
||||||||||||||||||||||||
Sbjct: 20 aatggcactggaagaattcacggg 43
>35202_aae-mir-263a:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggg 41
||||||||||||||||||||||||
Sbjct: 14 aatggcactggaagaattcacggg 37
>35297_aga-mir-263:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggg 41
||||||||||||||||||||||||
Sbjct: 14 aatggcactggaagaattcacggg 37
>35545_bmo-mir-263a:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggg 41
||||||||||||||||||||||||
Sbjct: 19 aatggcactggaagaattcacggg 42
>36030_cqu-mir-263:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggg 41
||||||||||||||||||||||||
Sbjct: 9 aatggcactggaagaattcacggg 32
>35073_api-mir-263a:mirbase
Length = 66
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 aatggcactggaagaattcacggggt 43
|||||||||| |||||||||||||||
Sbjct: 1 aatggcactgaaagaattcacggggt 26
>38872_lgi-mir-183:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 17 gaatggcactggaagaattcacgg 40
|||||||||||| |||||||||||
Sbjct: 20 gaatggcactggtagaattcacgg 43
