miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37765_tca-mir-275:mirbase
Length = 71
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 gctacgcgtgttacctcagtacctaggctggggtttttcgaaagtcaggtacctgaagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctacgcgtgttacctcagtacctaggctggggtttttcgaaagtcaggtacctgaagta 60
Query: 61 gcgcgcgcagc 71
|||||||||||
Sbjct: 61 gcgcgcgcagc 71
>34979_isc-mir-275:mirbase
Length = 101
Score = 61.9 bits (31), Expect = 5e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 37 ttcgaaagtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||||||||
Sbjct: 53 ttcgaaagtcaggtacctgaagtagcgcgcg 83
>37586_ngi-mir-275:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 ttcgaaagtcaggtacctgaagtagcgcgcgc 68
||||| ||||||||||||||||||||||||||
Sbjct: 36 ttcgatagtcaggtacctgaagtagcgcgcgc 67
>37617_nlo-mir-275:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 ttcgaaagtcaggtacctgaagtagcgcgcgc 68
||||| ||||||||||||||||||||||||||
Sbjct: 36 ttcgatagtcaggtacctgaagtagcgcgcgc 67
>37659_nvi-mir-275:mirbase
Length = 94
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 ttcgaaagtcaggtacctgaagtagcgcgcgc 68
||||| ||||||||||||||||||||||||||
Sbjct: 53 ttcgatagtcaggtacctgaagtagcgcgcgc 84
>35379_ame-mir-275:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcgc 68
||||||||||||||||||||||||||
Sbjct: 65 agtcaggtacctgaagtagcgcgcgc 90
>35021_dpu-mir-275:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 59 agtcaggtacctgaagtagcgcgcg 83
>35204_aae-mir-275:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 54 agtcaggtacctgaagtagcgcgcg 78
>35299_aga-mir-275:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 59 agtcaggtacctgaagtagcgcgcg 83
>35548_bmo-mir-275:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 49 agtcaggtacctgaagtagcgcgcg 73
>36031_cqu-mir-275:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 60 agtcaggtacctgaagtagcgcgcg 84
>36116_dan-mir-275:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 50 agtcaggtacctgaagtagcgcgcg 74
>36194_der-mir-275:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 53 agtcaggtacctgaagtagcgcgcg 77
>36283_dgr-mir-275:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 54 agtcaggtacctgaagtagcgcgcg 78
>36411_dme-mir-275:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 57 agtcaggtacctgaagtagcgcgcg 81
>36412_dme-mir-275:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 57 agtcaggtacctgaagtagcgcgcg 81
>36791_dmo-mir-275:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 54 agtcaggtacctgaagtagcgcgcg 78
>36868_dpe-mir-275:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 53 agtcaggtacctgaagtagcgcgcg 77
>36947_dps-mir-275:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 54 agtcaggtacctgaagtagcgcgcg 78
>37154_dse-mir-275:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 53 agtcaggtacctgaagtagcgcgcg 77
>37232_dsi-mir-275:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 53 agtcaggtacctgaagtagcgcgcg 77
>37368_dvi-mir-275:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 54 agtcaggtacctgaagtagcgcgcg 78
>37447_dwi-mir-275:mirbase
Length = 93
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 56 agtcaggtacctgaagtagcgcgcg 80
>37523_dya-mir-275:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 agtcaggtacctgaagtagcgcgcg 67
|||||||||||||||||||||||||
Sbjct: 53 agtcaggtacctgaagtagcgcgcg 77
>35075_api-mir-275:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 42 aagtcaggtacctgaagtagcgcg 65
||||||||||||||||||||||||
Sbjct: 39 aagtcaggtacctgaagtagcgcg 62
