miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37772_tca-mir-279a:mirbase
Length = 65
Score = 129 bits (65), Expect = 2e-31
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 1 cttgatgggttcgggtctagtggcacggttttttcaacttcgtgactagatccacactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgatgggttcgggtctagtggcacggttttttcaacttcgtgactagatccacactca 60
Query: 61 ttaag 65
|||||
Sbjct: 61 ttaag 65
>35383_ame-mir-279:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaag 65
||||||||||||||||||||||||
Sbjct: 66 gtgactagatccacactcattaag 89
>37662_nvi-mir-279:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaag 65
||||||||||||||||||||||||
Sbjct: 66 gtgactagatccacactcattaag 89
>35209_aae-mir-279:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 60 gtgactagatccacactcattaa 82
>35304_aga-mir-279:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 55 gtgactagatccacactcattaa 77
>36037_cqu-mir-279:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 48 gtgactagatccacactcattaa 70
>36121_dan-mir-279:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 55 gtgactagatccacactcattaa 77
>36199_der-mir-279:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 59 gtgactagatccacactcattaa 81
>36288_dgr-mir-279:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 57 gtgactagatccacactcattaa 79
>36421_dme-mir-279:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 66 gtgactagatccacactcattaa 88
>36422_dme-mir-279:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 66 gtgactagatccacactcattaa 88
>36796_dmo-mir-279:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 59 gtgactagatccacactcattaa 81
>36873_dpe-mir-279:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 59 gtgactagatccacactcattaa 81
>36953_dps-mir-279:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 61 gtgactagatccacactcattaa 83
>37159_dse-mir-279:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 59 gtgactagatccacactcattaa 81
>37237_dsi-mir-279:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 59 gtgactagatccacactcattaa 81
>37373_dvi-mir-279:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 60 gtgactagatccacactcattaa 82
>37452_dwi-mir-279:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 57 gtgactagatccacactcattaa 79
>37528_dya-mir-279:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 gtgactagatccacactcattaa 64
|||||||||||||||||||||||
Sbjct: 59 gtgactagatccacactcattaa 81
>38883_lgi-mir-279:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 tgactagatccacactcat 61
|||||||||||||||||||
Sbjct: 61 tgactagatccacactcat 79
>38773_cte-mir-279:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 tgactagatccacactcat 61
|||||||||||||||||||
Sbjct: 61 tgactagatccacactcat 79
>34982_isc-mir-279:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 tgactagatccacactcat 61
|||||||||||||||||||
Sbjct: 52 tgactagatccacactcat 70
>35024_dpu-mir-279:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 tgactagatccacactcat 61
|||||||||||||||||||
Sbjct: 60 tgactagatccacactcat 78
>35079_api-mir-279a:mirbase
Length = 64
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 tgactagatccacactcat 61
|||||||||||||||||||
Sbjct: 44 tgactagatccacactcat 62
>35552_bmo-mir-279a:mirbase
Length = 85
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 tgactagatccacactcat 61
|||||||||||||||||||
Sbjct: 52 tgactagatccacactcat 70
>37773_tca-mir-279b:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 tgactagatccacactcat 61
|||||||||||||||||||
Sbjct: 59 tgactagatccacactcat 77
>37774_tca-mir-279b:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 tgactagatccacactcat 61
|||||||||||||||||||
Sbjct: 59 tgactagatccacactcat 77
