miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37778_tca-mir-279d:mirbase
Length = 142
Score = 281 bits (142), Expect = 7e-77
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 1 atcaagagtggccccaaaaaccaatgaaaacactgtgttggcgattgtgggtttagtcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcaagagtggccccaaaaaccaatgaaaacactgtgttggcgattgtgggtttagtcca 60
Query: 61 cgttttagtaaaccgtgactagatccatactcgtctatagaggtttttagcacgacttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgttttagtaaaccgtgactagatccatactcgtctatagaggtttttagcacgacttgg 120
Query: 121 gccccacaagccaactcctcca 142
||||||||||||||||||||||
Sbjct: 121 gccccacaagccaactcctcca 142
>35554_bmo-mir-279c:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tgactagatccatactcgtct 96
|||||||||||||||||||||
Sbjct: 49 tgactagatccatactcgtct 69
>35410_ame-mir-996:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 cgtgactagatccatactcgtcta 97
||||||||||| ||||||||||||
Sbjct: 54 cgtgactagatacatactcgtcta 77
