miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37780_tca-mir-279e:mirbase
          Length = 95

 Score =  188 bits (95), Expect = 5e-49
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  cggtggagctctcggtgtaagccagtgttcagtctattgtttcacattggtttcgattgt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cggtggagctctcggtgtaagccagtgttcagtctattgtttcacattggtttcgattgt 60

                                             
Query: 61 gactagatcgaacactcgcttgcaacctgggtttg 95
          |||||||||||||||||||||||||||||||||||
Sbjct: 61 gactagatcgaacactcgcttgcaacctgggtttg 95




>37775_tca-mir-279c:mirbase
          Length = 112

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 57 ttgtgactagatcgaacactcgct 80
          |||||||||||||||||| |||||
Sbjct: 62 ttgtgactagatcgaacattcgct 85




>37776_tca-mir-279c:mirbase
          Length = 112

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 57 ttgtgactagatcgaacactcgct 80
          |||||||||||||||||| |||||
Sbjct: 62 ttgtgactagatcgaacattcgct 85