miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37800_tca-mir-316:mirbase
Length = 89
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 gccacacttgtgaacgtgtctttttccgctttgctgccgctgttctgtcgtcgccagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccacacttgtgaacgtgtctttttccgctttgctgccgctgttctgtcgtcgccagcag 60
Query: 61 agaggatgaggctagtgcacgagttgacc 89
|||||||||||||||||||||||||||||
Sbjct: 61 agaggatgaggctagtgcacgagttgacc 89
>35393_ame-mir-316:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 gtgtctttttccgctttgctgccgctg 42
|||||||||||||||||||||||||||
Sbjct: 15 gtgtctttttccgctttgctgccgctg 41
>35086_api-mir-316:mirbase
Length = 62
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tgtctttttccgctttgctgccg 39
|||||||||||||||||||||||
Sbjct: 1 tgtctttttccgctttgctgccg 23
>35566_bmo-mir-316:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 tgtctttttccgctttgctgc 37
|||||||||||||||||||||
Sbjct: 11 tgtctttttccgctttgctgc 31